Items where Academic Unit is "Faculty of Science and Engineering > Biology"


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Zachariadis, O. and Cassidy, J.P. and Brady, J. and Mahon, B.P. (2006) gamma-delta T Cells Regulate the Early Inflammatory Response to Bordetella pertussis Infection in the Murine Respiratory Tract. Infection and Immunity, 74. pp. 1837-1845.

A

Abraham, K. and Mielke, H. and Huisinga, W. and Gundert-Remy, U. (2005) Internal Exposure of Children by Simulated Acute Inhalation of Volatile Organic Compounds: The Influence of Chemical Properties on the Child/Adult Concentration Ratio. Basic & Clinical Pharmacology & Toxicology (BCPT), 96 (3). pp. 242-243. ISSN 1742-7843

Abraham, Klaus and Mielke, Hans and Huisinga, Wilhelm and Gundert-Remy, Ursula (2005) Elevated Internal Exposure of Children in Simulated Acute Inhalation of Volatile Organic Compounds: Effects of Concentration and Duration. Archives of Toxicology, 79 (2). pp. 63-73. ISSN 1432-0738

Abuskhuna, A. and Briody, J.M. and McCann, M. and Devereux, M. and Kavanagh, K.A. and Fontecha, J.B. and McKee, V. (2004) Synthesis, structure and anti-fungal activity of dimeric Ag(I) complexes containing bis-imidazole ligands. Polyhedron, 23. pp. 1249-1255.

Abuskhuna, Suaad and McCann, Malachy and Briody, John and Devereux, Michael and Kavanagh, Kevin and Kayal, Nijhuma and McKee, Vickie (2007) Synthesis and structure of metal complexes containing zwitterionic N-hydroxyimidazole ligands. Polyhedron, 26 (15). pp. 4573-4580. ISSN 0277-5387

Adams, B.J. and Burnell, A.M. and Powers, T.O. (1998) A Phylogenetic Analysis of Heterorhabditis (Nemata :Rhabditidae) Based on Internal Transcribed Spacer 1 DNA Sequence Data. Journal of Nematology, 30 (1). pp. 22-39.

Adams, Keith L. and Song, Keming and Roessler, Philip G. and Nugent, Jacqueline M. and Doyle, Jane L. and Doyle, Jeff J. and Palmer, Jeffrey D. (1999) Intracellular gene transfer in action: Dual transcription and multiple silencings of nuclear and mitochondrial cox2 genes in legumes. Proceedings of the National Academy of Sciences, 96 (24). pp. 13863-13868. ISSN 1091-6490

Ahmed, Yasar Luqman and Gerke, Jennifer and Park, Hee-Soo and Bayram, Ozgur and Neumann, Piotr and Ni, Min and Dickmanns, Achim and Kim, Sun Chang and Yu, Jae-Hyuk and Braus, Gerhard H. and Ficner, Ralf (2013) The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kB. PLoS Biology, 11 (12). e1001750. ISSN 1545-7885

Akanni, Wasiu (2014) Developing and applying supertree methods in Phylogenomics and Macroevolution. PhD thesis, National University of Ireland Maynooth.

Akesson, A. and Ingvarsson, S. and Brady, K. and Moynagh, P.N. and Borrebaeck, C.A.K. (2000) Rapid polarization of Th2 cells during induction of antigen-specific IgE antibodies in vitro. Clinical and Experimental Allergy, 30 (9). pp. 1298-1306. ISSN 0954-7894

Al-Rawi, Nada and Kavanagh, Kevin (1998) A rapid method for the extraction of whole cell proteins from Candida species. Journal of Microbiological Methods, 34 (2). pp. 107-112. ISSN 0167-7012

Alsaiyah, Mohamed A.M. and Ebssa, Lemma and Zenner, Annemie N.R.L. and O'Callaghan, Kathryn M. and Griffin, Christine T. (2009) Sex ratios and sex-biased infection behaviour in the entomopathogenic nematode genus Steinernema. International Journal for Parasitology, 39. pp. 725-734. ISSN 0020-7519

Altpeter, Fredy and Baisakh, Niranjan and Beachy, Roger and Bock, Ralph and Capell, Teresa and Christou, Paul and Daniell, Henry and Datta, Karabi and Datta, Swapan and Dix, Philip J. and Fauquet, Claude and Huang, Ning and Kohli, Ajay and Mooibroek, Hans and Nicholson, Liz and Nguyen, Thi Thanh and Nugent, Gregory and Raemakers, Krit and Romano, Andrea and Somers, David A. and Stoger, Eva and Taylor, Nigel and Visser, Richard (2005) Particle bombardment and the genetic enhancement of crops: myths and realities. Molecular Breeding, 15 (3). pp. 305-327. ISSN 1380-3743

Amich, Jorge and Dümig, Michaela and O'Keeffe, Grainne and Binder, Jasmin and Doyle, Sean and Beilhack, Andreas and Krappmann, Sven (2016) Exploration of Sulfur Assimilation of Aspergillus fumigatus Reveals Biosynthesis of Sulfur-Containing Amino Acids as a Virulence Determinant. Infection and Immunity, 84 (4). pp. 917-929. ISSN 0019-9567

An, Lu and Fitzpatrick, David A. and Harrison, Paul M. (2016) Emergence and evolution of yeast prion and prion-like proteins. BMC Evolutionary Biology, 16 (24). ISSN 1471-2148

Ansell, Richard J. and Tunon, Pilar Gonzalez and Wang, Yating and Myers, Peter and Ivory, Cornelius F. and Keen, Jeffrey N. and Findlay, John B. C. (2009) Electrophoretic field gradient focusing with on-column detection by fluorescence quenching. Analyst, 134. pp. 226-229. ISSN 0003-2654

Armit, Christopher J. and O'Dea, Shirley and Clarke, Alan R. and Harrison, David J. (2002) Absence of p53 in Clara cells favours multinucleation and loss of cell cycle arrest. BMC Cell Biology, 3 (27). ISSN 1471-2121

Atzei, Paola and Yang, Fan and Collery, Ross and Kennedy, Breandan N. and Moynagh, Paul N. (2010) Characterisation of expression patterns and functional role of Cactin in early zebrafish development. Gene Expression Patterns, 10 (4/5). pp. 199-206. ISSN 1567-133X

Atzei, Paola and Gargan, Siobhan and Curran, Niamh and Moynagh, Paul N. (2010) Cactin Targets the MHC Class III Protein IκB-like (IκBL) and Inhibits NF-κB and Interferon-regulatory Factor Signaling Pathways. Journal of Biological Chemistry, 285 (47). pp. 36804-36817. ISSN 0021-9258

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Banville, Nessa (2011) Characterisation of the G. mellonella cellular innate immune response and a comparison with the human neutrophil. PhD thesis, National University of Ireland Maynooth.

Banville, Nessa and Browne, Niall and Kavanagh, Kevin (2012) Effect of nutrient deprivation on the susceptibility of Galleria mellonella larvae to infection. Virulence, 3 (6). pp. 497-503. ISSN 2150-5594

Banville, Nessa and Fallon, John and McLoughlin, Kirstin and Kavanagh, Kevin (2011) Disruption of haemocyte function by exposure to cytochalasin b or nocodazole increases the susceptibility of Galleria mellonella larvae to infection. Microbes and Infection, 13. pp. 1191-1198. ISSN 1286-4579

Bapteste, Eric and Lopez, Philippe and Bouchard, Frédéric and Baquero, Fernando and McInerney, James O. and Burian, Richard M. (2012) Evolutionary analyses of non-genealogical bonds produced by introgressive descent. Proceedings of the National Academy of Sciences, 109 (145). pp. 18266-8272. ISSN 1091-6490

Barillot, C. and Coupé, P. and El Ganaoui, O. and Gibaud, B and Hellier, P. and Jannin, P. and Paul, P. and Prima, S. and Wiest-Daesslé, N. and Morandi, X. (2007) Image guidance in neurosurgical procedures, the "Visages" point of view. In: 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. Proceedings. IEEE, pp. 1056-1059. ISBN 1-4244-0672-2

Barnard, A. and Mahon, B.P. and Watkins, J. and Readhead, K. and Mills, K.H.G. (1996) Thl/Th2 cell dichotomy in acquired immunity to Bordetella pertussis: variables in the in vivo priming and in vitro cytokine detection techniques affect the classification of T-cell subsets as Thl, Th2 or ThO. Immunology, 87 (3). pp. 372-380. ISSN 0019-2805

Barribeau, Seth M. and Sadd, Ben M. and du Plessis, Louis and Brown, Mark J.F. and Buechel, Severine D. and Chappelle, Kaat and Carolan, James C. and Christiaens, Oliver and Colgan, Thomas J. and Erler, Silvio and Evans, Jay and Helbing, Sophie and Karaus, Elke and Lattorff, H. Michael and Marxer, Monica and Meeus, Ivan and Näpflin, Kathrin and Niu, Jinzhi and Schmid-Hempe, Regula and Smagghe, Guy and Waterhouse, Robert M. and Yu, Na and Zdobnov, Evgeny and Schmid-Hempel, Paul (2015) A depauperate immune repertoire precedes evolution of sociality in bees. Genome Biology, 16 (83). pp. 1-20. ISSN 1465-6906

Barry, Frank P. and Murphy, Mary and O'Brien, Timothy and Mahon, Bernard (2005) Mesenchymal Stem Cell Transplantation for Tissue Repair. Seminars in Plastic Surgery, 19 (3). pp. 229-239. ISSN 1535-2188

Bayram, Ozgur and Bayram, Ozlem Sarikaya and Ahmed, Yasar Luqman and Maruyama, Jun-ichi and Valerius, Oliver and Rizzoli, Silvio O. and Ficner, Ralf and Irniger, Stefan and Braus, Gerhard H. (2012) The Aspergillus nidulans MAPK Module AnSte11-Ste50- Ste7-Fus3 Controls Development and Secondary Metabolism. PLos Genetics, 8 (7). e1002816. ISSN 1553-7390

Bayram, Ozgur and Biesemann, Christoph and Krappmann, Sven and Galland, Paul and Braus, Gerhard H. (2008) More Than a Repair Enzyme: Aspergillus nidulans Photolyase-like CryA Is a Regulator of Sexual Development. Molecular Biology of the Cell, 19 (8). pp. 3254-3262. ISSN 1059-1524

Bayram, Ozgur and Braus, Gerhard H. (2012) Coordination of secondary metabolism and development in fungi: the velvet family of regulatory proteins. FEMS Microbiology Reviews, 36 (1). pp. 1-24. ISSN 0168-6445

Bayram, Ozgur and Krappmann, Sven and Seiler, Stephan and Vogt, Nico and Braus, Gerhard H. (2008) Neurospora crassa ve-1 affects asexual conidiation. Fungal Genetics and Biology, 45 (2). pp. 127-138. ISSN 1087-1845

Bayram, Ozgur and Sari, Fatih and Braus, Gerhard H. and Irniger, Stefan (2009) The protein kinase ImeB is required for light-mediated inhibition of sexual development and for mycotoxin production in Aspergillus nidulans. Molecular Microbiology, 71 (5). pp. 1278-1295. ISSN 0950-382X

Bayram, Ozlem Sarikaya and Bayram, Ozgur and Valerius, Oliver and Park, Hee-Soo and Irniger, Stefan and Gerke, Jennifer and Ni, Min and Han, Kap-Hoon and Yu, Jae-Hyuk and Braus, Gerhard H. (2010) LaeA Control of Velvet Family Regulatory Proteins for Light-Dependent Development and Fungal Cell-Type Specificity. PLoS Genetics, 6 (12). e1001226. ISSN 1553-7390

Bergin, David and Murphy, Lisa and Keenan, Joanne and Clynes, Martin and Kavanagh, Kevin (2006) Pre-exposure to yeast protects larvae of Galleria mellonella from a subsequent lethal infection by Candida albicans and is mediated by the increased expression of antimicrobial peptides. Microbes and Infection. (In Press)

Bergin, David and Reeves, Emer P. and Renwick, Julie and Wientjes, Frans B. and Kavanagh, Kevin (2005) Superoxide Production in Galleria mellonella Hemocytes: Identification of Proteins Homologous to the NADPH Oxidase Complex of Human Neutrophils. Infection and Immunity, 73 (7).

Bergin, David and Reeves, Emer P. and Renwick, Julie and Wientjes, Frans B. and Kavanagh, Kevin (2005) Superoxide Production in Galleria mellonella Hemocytes: Identification of Proteins Homologous to the NADPH Oxidase Complex of Human Neutrophils. Infection and Immunity, 73 (7). pp. 4161-4170.

Bergin, David and Brennan, Marc and Kavanagh, Kevin (2003) Fluctuations in haemocyte density and microbial load may be used as indicators of fungal pathogenicity in larvae of Galleria mellonella. Microbes and Infection, 5 (15). pp. 1389-1395. ISSN 1286-4579

Blundell, Renald and Harrison, David J. and O'Dea, Shirley (2004) p21(Waf1/Cip1) regulates proliferation and apoptosis in airway epithelial cells and alternative forms have altered binding activities. Experimental Lung Research, 30 (6). pp. 447-464. ISSN 0190-2148

Boo, T.W. and Walsh, Fiona and Crowley, B. (2006) First report of OXA-23 carbapenemase in clinical isolates of Acinetobacter species in the Irish Republic. Journal of Antimicrobial Chemotherapy, 58 (5). pp. 1101-1102. ISSN 0305-7453

Boo, T.W. and Walsh, Fiona and Crowley, B. (2009) Molecular characterization of carbapenem-resistant Acinetobacter species in an Irish university hospital: predominance of Acinetobacter genomic species 3. Journal of Medical Microbiology, 58 (2). pp. 209-216. ISSN 0022-2615

Bourke, Emer and Kennedy, Eugene J. and Moynagh, Paul N. (2000) Loss of IκB-β Is Associated with Prolonged NF-κB Activity in Human Glial Cells. Journal of Biological Chemistry, 275 (51). pp. 39996-40002. ISSN 0021-9258

Bourke, Emer and Moynagh, Paul N. (1999) Antiinflammatory Effects of Glucocorticoids in Brain Cells, Independent of NF-kB. Journal of Immunology, 163. pp. 2113-2119. ISSN 0022-1767

Bowie, Andrew G. and Moynagh, Paul N. and O'Neill, Luke A.J. (1997) Lipid Peroxidation Is Involved in the Activation of NF-kB by Tumor Necrosis Factor but Not Interleukin-1 in the Human Endothelial Cell Line ECV304. Journal of Biological Chemistry, 272 (41). pp. 25941-25950. ISSN 0021-9258

Brady, Karen and Fitzgerald, Stephen and Ingvarsson, Sigurdur and Borrebaeck, Carl A.K. and Moynagh, Paul N. (2001) CD40 Employs p38 MAP Kinase in IgE Isotype Switching. Biochemical and Biophysical Research Communications, 289 (1). pp. 276-281. ISSN 0006-291X

Brady, Kevin J. and Fitzgerald, Stephen and Moynagh, Paul N. (2000) Tumour-necrosis-factor-receptor-associated factor 6, NF-jB-inducing kinase and IjB kinases mediate IgE isotype switching in response to CD40. Biochemical Journal, 350. pp. 735-740. ISSN 0264-6021

Brady, Miriam T. and Mahon, Bernard P. and Mills, Kingston H.G. (1998) Pertussis infection and vaccination induces Th1 cells. Immunology Today, 19 (11). p. 534. ISSN 0167-5699

Breen, Conor J. and Martin, Darren S. and Ma, Hui and McQuaid, Kate and O'Kennedy, Richard and Findlay, John B. C. (2015) Production of Functional Human Vitamin A Transporter/RBP Receptor (STRA6) for Structure Determination. PLoS ONE, 10 (3). e0122293. ISSN 1932-6203

Brennan, Marc and Thomas, David Y. and Whiteway, Malcolm and Kavanagh, Kevin (2002) Correlation between virulence of Candida albicans mutants in mice and Galleria mellonella larvae. FEMS Immunology and Medical Microbiology, 34 (2). pp. 153-157. ISSN 0928-8244

Brennan, Ruth (2013) Investigating the cellular localisation of DEAD box helicase DDX3. PhD thesis, National University of Ireland Maynooth.

Browne, John and Tunnacliffe, Alan and Burnell, Ann (2002) Plant desiccation gene found in a nematode. Nature, 416. p. 38.

Browne, John A. and Dolan, Katharine M. and Tyson, Trevor and Goyal, Kshamata and Tunnacliffe, Alan and Burnell, Ann M. (2004) Dehydration-Specific Induction of Hydrophilic Protein Genes in the Anhydrobiotic Nematode Aphelenchus avenae. Eukaryotic Cell, 3 (4). pp. 966-975.

Browne, Niall and Hackenberg, Frauke and Streciwilk, Wojciech and Tacke, Matthias and Kavanagh, Kevin (2014) Assessment of in vivo antimicrobial activity of the carbene silver(I) acetate derivative SBC3 using Galleria mellonella larvae. Biometals, 27 (4). pp. 745-752. ISSN 0966-0844

Browne, Niall and Heelan, Michelle and Kavanagh, Kevin (2013) An analysis of the structural and functional similarities of insect hemocytes and mammalian phagocytes. Virulence, 4 (4). pp. 1-7. ISSN 2150-5594

Browne, Niall and Kavanagh, Kevin (2013) Developing the potential of using Galleria mellonella larvae as models for studying brain infection by Listeria monocytogenes. Virulence, 4 (4). pp. 271-272. ISSN 2150-5594

Browne, Niall and Surlis, Carla and Kavanagh, Kevin (2014) Thermal and physical stresses induce a short-term immune priming effect in Galleria mellonella larvae. Journal of Insect Physiology, 63. pp. 21-26. ISSN 0022-1910

Bruni, Daniela and Sebastia, Jordi and Dunne, Susan and Schroeder, Martina and Butler, Marion P. (2013) A Novel IRAK1–IKKԑ Signaling Axis Limits the Activation of TAK1–IKKb Downstream of TLR3. Journal of Immunology, 190. pp. 2844-2856. ISSN 0022-1767

Buckley, Stephen and Mahon, Bernard (2010) Bonus points for maths. The Irish Times, Oct. (12th).

Burbridge, Emma and Kjærsgaard Rasmussen, Søren and Bernier, Francois and Kaare Kristensen, Brian and McCabe, Paul Francis and Dix, Philip J. (2014) Altered Activity of Peroxidase and Oxalate Oxidase Influences Lignification in Transgenic Tobacco. The Open Plant Science Journal, 2014, 8, 1-8, 8. pp. 1-8. ISSN 1874-2947

Burnell, Ann M. and Dowds, Barbara C.A. (1996) The Genetic Improvement of Entomopathogenic Nematodes and Their Symbiont Bacteria: Phenotypic Targets, Genetic Limitations and an Assessment of Possible Hazards. Biocontrol Science and Technology, 6. pp. 435-447.

Burnell, Ann M. and Houthoofd, Koen and O'Hanlon, Karen and Vanfleteren, Jacques R. (2005) Alternate metabolism during the dauer stage of the nematode Caenorhabditis elegans. Experimental Gerontology, 40. pp. 850-856.

Burnell, Ann M. and O'Halloran, Damien M. (2004) Chemoreceptor genes: what can we learn from Caenorhabditis elegans and how can we apply this information to studies on other nematodes? Nematology Monographs & Perspectives, 2. pp. 707-714.

Burnell, Ann M. and Stock, S. Patricia (2000) Heterorhabditis, Steinernema and their bacterial symbionts - lethal pathogens of insects. Nematology, 2 (1). pp. 31-42.

Burns, Claire and Geraghty, Rachel and Neville, Claire and Murphy, Alan and Kavanagh, Kevin and Doyle, Sean (2005) Identification, cloning, and functional expression of three glutathione transferase genes from Aspergillus fumigatus. Fungal Genetics and Biology, 42 (4). pp. 319-327. ISSN 1087-1845

Busch, Silke and Schwier, Elke U. and Nahlik, Krystyna and Bayram, Ozgur and Helmstaedt, Kerstin and Draht, Oliver W. and Krappmann, Sven and Valerius, Oliver and Lipscomb, William N. and Braus, Gerhard H. (2007) An eight-subunit COP9 signalosome with an intact JAMM motif is required for fungal fruit body formation. Eukaryotic Cell, 104 (19). pp. 8089-8094. ISSN 1535-9778

Butler, M.P. and O'Connor, J.J. and Moynagh, P.N. (2004) Dissection of Tumor-Necrosis Factor-α Inhibition of Longterm Potentiation (LTP) Reveals a p38 Mitogen-Activated Protein Kinase-Dependent Mechanism which Maps to Early - But Not Late-Phase LTP. Neuroscience, 124 (2). pp. 319-326. ISSN 0306-4522

Butler, Marion P. and Hanly, Jennifer A. and Moynagh, Paul N. (2007) Kinase-active Interleukin-1 Receptor-associated Kinases Promote Polyubiquitination and Degradation of the Pellino Family : direct evidence for PELLINO proteins being ubiquitin-protein isopeptide ligases. Journal of Biological Chemistry, 282 (41). pp. 29729-29737. ISSN 0021-9258

Butler, Marion P. and Hanly, Jennifer A. and Moynagh, Paul N. (2005) Pellino3 Is a Novel Upstream Regulator of p38 MAPK and Activates CREB in a p38-dependent Manner. Journal of Biological Chemistry, 280 (30). pp. 27759-27768. ISSN 0021-9258

Butler, Marion P. and Moynagh, Paul N. and O'Connor, John J. (2002) Methods of detection of the transcription factor NF-kB in rat hippocampal slices. Journal of Neuroscience Methods, 119 (2). pp. 185-190. ISSN 0165-0270

Byrne, Laura A. (2010) Analytical assessment of peptide-mental interactions and subsequent stability. PhD thesis, National University of Ireland Maynooth.

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Caboni, Laura and Kinsella, Gemma K. and Blanco, Fernando and Fayne, Darren and Jagoe, William M. and Carr, Miriam and Williams, D. Clive and Meegan, Mary J. and Lloyd, David G. (2012) “True” Antiandrogens : Selective Non-Ligand-Binding Pocket Disruptors of Androgen Receptor−Coactivator Interactions: Novel Tools for Prostate Cancer. Journal of Medicinal Chemistry, 55. pp. 1635-1644. ISSN 0022-2623

Cahill, Emer (2014) The Role of Mesenchymal Stromal Cells in Inflammation and Treatment of Pulmonary Fibrosis. PhD thesis, National University of Ireland Maynooth.

Cahill, Emer and Tobin, Laura M. and Carthy, Fiona and Mahon, Bernard P. and English, Karen (2015) Jagged-1 is required for the expansion of CD4+ CD25+ FoxP3+ regulatory T cells and tolerogenic dendritic cells by murine mesenchymal stromal cells. Stem Cell Research and Therapy, 6 (19). ISSN 1757-6512

Campbell, Lahcen I. (2012) A cause for consilience: Utilizing multiple genomic data types to resolve problematic nodes within Arthropoda and Ecdysozoa. PhD thesis, National University of Ireland Maynooth.

Campos-Sandoval, Jose Angel and Redondo, Clara and Kinsella, Gemma K. and Pal, Akos and Jones, Geraint and Eyre, Gwen S. and Hirst, Simon C, and Findlay, John B. C. (2011) Fenretinide Derivatives Act as Disrupters of Interactions of Serum Retinol Binding Protein (sRBP) with Transthyretin and the sRBP Receptor. Journal of Medicinal Chemistry, 54. pp. 4378-4387. ISSN 0022-2623

Canavan, Mary and McCarthy, Ciara and Ben Larbi, Nadia and Dowling, Jennifer and Collins, Laura and O'Sullivan, Finbarr and Hurley, Grainne and Murphy, Carola and Quinlan, Aoife and Moloney, Gerry and Darby, Trevor and MacSharry, John and Kagechika, Hiroyuki and Moynagh, Paul N. and Melgar, Silvia and Loscher, Christine E. (2013) Activation of liver X receptor suppresses the production of the IL-12 family of cytokines by blocking nuclear translocation of NF-kBp50. Innate Immunity. ISSN 1753-4259

Carberry, Stephen and Doyle, Sean (2007) Proteomic studies in biomedically and industrially relevant fungi. Cytotechnology, 53 (1-3). pp. 95-100. ISSN 0920-9069

Carberry, Stephen and Neville, Claire M. and Kavanagh, Kevin A. and Doyle, Sean (2006) Analysis of major intracellular proteins of Aspergillus fumigatus by MALDI mass spectrometry: Identification and characterisation of an elongation factor 1B protein with glutathione transferase activity. Biochemical and Biophysical Research Communications, 341 (4). pp. 1096-1104. ISSN 0006-291X

Carberry, Stephen and Molloy, Emer and Hammel, Stephen and O'Keefe, Grainne and Jones, Gary W. and Kavanagh, Kevin and Doyle, Sean (2012) Gliotoxin effects on fungal growth: Mechanisms and exploitation. Fungal Genetics and Biology, 49 (4). pp. 302-312. ISSN 1087-1845

Carberry, Steven (2014) Proteomic Profiling of the mdx Animal Model for Duchenne Muscular Dystrophy. PhD thesis, National University of Ireland Maynooth.

Carberry, Steven and Brinkmeier, Heinrich and Zhang, Yaxin and Winkler, Claudia K. and Ohlendieck, Kay (2013) Comparative proteomic profiling of soleus, extensor digitorum longus, flexor digitorum brevis and interosseus muscles from the mdx mouse model of Duchenne muscular dystrophy. International Journal of Molecular Medicine, 32 (374). pp. 544-556. ISSN 1107-3756

Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2013) Application of Fluorescence Two-Dimensional Difference In-Gel Electrophoresis as a Proteomic Biomarker Discovery Tool in Muscular Dystrophy Research. Biology, 2. pp. 1438-1464. ISSN 2079-7737

Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2014) Comparative proteomic analysis of the contractile-protein-depleted fraction from normal versus dystrophic skeletal muscle. Analytical Biochemistry, 446. pp. 108-115. ISSN 0003-2697

Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2012) Profiling of Age-Related Changes in the Tibialis Anterior Muscle Proteome of the mdx Mouse Model of Dystrophinopathy. Journal of Biomedicine and Biotechnology, 2012 (691641). ISSN 1110-7243

Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2012) Proteomics reveals drastic increase of extracellular matrix proteins collagen and dermatopontin in the aged mdx diaphragm model of Duchenne muscular dystrophy. International Journal of Molecular Medicine, 30 (2). pp. 229-234. ISSN 1107-3756

Carolan, James C. and Murray, Tomas E. and Fitzpatrick, Una and Crossley, John and Schmidt, Hans and Cederberg, Bjorn and McNally, Luke and Paxton, Robert J. and Williams, Paul H. and Brown, Mark J. F. (2012) Colour Patterns Do Not Diagnose Species: Quantitative Evaluation of a DNA Barcoded Cryptic Bumblebee Complex. PLoS ONE, 7 (1). e29251. ISSN 1932-6203

Carolan, James C. and Caragea, Doina and Reardon, Karen T. and Mutti, Navdeep S. and Dittmer, Neal and Pappan, Kirk and Cui, Feng and Castaneto, Marisol and Poulain, Julie and Dossat, Carole and Tagu, Denis and Reese, John C. and Reeck, Gerald R. and Wilkinson, Thomas L. and Edwards, Owain R. (2011) Predicted Effector Molecules in the Salivary Secretome of the Pea Aphid (Acyrthosiphon pisum): A Dual Transcriptomic/Proteomic Approach. Journal of Proteome Research, 10 (4). pp. 1505-1518. ISSN 1535-3893

Carolan, James C. and Fitzroy, Carol I.J. and Ashton, Peter D. and Douglas, Angela E. and Wilkinson, Thomas L. (2009) The secreted salivary proteome of the pea aphid Acyrthosiphon pisum characterised by mass spectrometry. Proteomics, 9 (9). pp. 2457-2467. ISSN 1615-9853

Carolan, James C. and Hook, I.L.I. and Walsh, J.J. and Hodkinson, Trevor R. (2002) Using AFLP Markers for Species Differentiation and Assessment of Genetic Variability of in Vitro-Cultured Papaver Bracteatum (Section Oxytona). In Vitro Cellular & Developmental Biology - Plant, 38 (3). pp. 300-307.

Carolan, James C. and Hook, Ingrid L.I. and Chanse, Mark W. and Kadereit, Joachim W. and Hodkinson, Trevor R. (2006) Phylogenetics of Papaver and Related Genera Based on DNA Sequences from ITS Nuclear Ribosomal DNA and Plastid trnL Intron and trnL–F Intergenic Spacers. Annals of Botany, 98 (1). pp. 141-155. ISSN 0305-7364

Carr, Derek P. (2012) Assessment of alternative uses for lignocellulosic waste products. PhD thesis, National University of Ireland Maynooth.

Carr, Michael J. and McCormack, Grace P. and Crowley, Brendan (2004) Genetic Variation in Clinical Varicella-Zoster Virus Isolates Collected in Ireland Between 2002 and 2003. Journal of Medical Virology, 73 (1). pp. 131-136.

Casey, D.G. and Burnell, A.M. (2001) The isolation of microsatellite loci in the Mediterranean fruitfly Ceratitis capitata (Diptera: Tephritidae) using a biotin/streptavidin enrichment technique. Molecular Ecology Notes, 1. pp. 120-122.

Casey, Orla M. and Fitzpatrick, Richard and McInerney, James O. and Morris, Dermot G. and Powell, Richard and Sreenan, Joseph M. (2004) Analysis of gene expression in the bovine corpus luteum through generation and characterisation of 960 ESTs. Biochimica et Biophysica Acta, 1679 (1). pp. 10-17.

Chapman, Kathryn L. and Findlay, John B. C. (2013) The melanocortin 4 receptor: Oligomer formation, interaction sites and functional significance. Biochimica et Biophysica Acta, 1828. pp. 535-542. ISSN 0005-2736

Chikkala, Veera R.N. and Nugent, Gregory D. and Dix, Philip J. and Stevenson, Trevor W. (2009) 'Regeneration from leaf explants and protoplasts of Brassica oleracea var. botrytis (cauliflower). Scientia Horticulturae, 119. pp. 330-334. ISSN 0304-4238

Christmann, Martin and Schmaler, Tilo and Gordon, Colin and Huang, Xiachua and Bayram, Ozgur and Schinke, Josua and Stumpf, Sina (2013) Control of Multicellular Development by the Physically Interacting Deneddylases DEN1/DenA and COP9 Signalosome. PLoS Genetics, 9 (2). e1003275. ISSN 1553-7390

Clarke, Michael and Lohan, Amanda and Liu, Bernard and Lagkouvardos, Ilias and Roy, Scott and Zafar, Nikhat and Bertelli, Claire and Schilde, Christina and Kianianmomeni, Arash and Burglin, Thomas R. and Frech, Christian and Turcotte, Bernard and Kopec, Klaus O. and Synnott, John M. and Choo, Caleb and Paponov, Ivan and Finkler, Aliza and Soon Heng Tan, Chris and Hutchins, Andrew P. and Weinmeier, Thomas and Ratteri, Thomas and Chu, Jeffery SC and Gimenez, Gregory and Irimia, Manuel and Rigden, Daniel J. and Fitzpatrick, David A. and Lorenzo-Morales, Jacob and Baterman, Alex and Chiu, Cheng-Hsun and Tang, Petrus and Hegemann, Peter and Fromm, Hillel and Raoult, Didier and Greub, Gilbert and Miranda-Saavedra, Diego and Chen, Nansheng and Nash, Piers and Ginger, Michael L. and Horn, Matthias and Schaap, Pauline and Caler, Lis and Loftus, Brendan J. (2013) Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Genome Biology, 14 (R11). ISSN 1465-6906

Codoñer, Francisco M. and O'Dea, Shirley and Fares, Mario A. (2008) Reducing the false positive rate in the non-parametric analysis of molecular coevolution. BMC Evolutionary Biology, 8 (106). ISSN 1471-2148

Coen, Enrico S. and Nugent, Jacqueline M. (1994) Evolution of flowers and inflorescences. Development, Suppl.. pp. 107-116. ISSN 0950-1991

Coen, Enrico S. and Nugent, Jacqueline M. and Luo, Da and Bradley, Desmond and Cubas, Pilar and Chadwick, Mark and Copsey, Lucy and Carpenter, Rosemary (1995) Evolution of floral symmetry. Philosophical Transactions: Biological Sciences, 350 (1331). pp. 35-38. ISSN 0962-8436

Colabardini, Ana Christina and Humanes, Ana Carolina and Fagundes Gouvea, Paula and Savoldi, Marcela and Goldman, Maria Helena S. and von Zeska Kress, Marcia Regina and Bayram, Ozgur and Gomes, Marcelo Damario and Braus, Gerhard H. and Goldman, Gustavo H. (2012) Molecular characterization of the Aspergillus nidulans fbxA encoding an F-box protein involved in xylanase induction. Fungal Genetics and Biology, 49 (2). pp. 130-140. ISSN 1087-1845

Colgan, Thomas J. and Carolan, James C. and Bridgett, Stephen J. and Sumner, Seirian and Blaxter, Mark L. and Brown, Mark J.F. (2011) Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris. BMC Genomics, 12 (623). pp. 1-20. ISSN 1471-2164

Collins, Cassandra (2013) A Genomic and Proteomic Investigation of the Plant Pathogen Armillaria mellea: Buried Treasure or Hidden Threat? PhD thesis, National University of Ireland Maynooth.

Collins, Peter R. and Stack, Colin M. and O'Neill, Sandra M. and Doyle, Sean and Ryan, Thecla and Brennan, Gerard P. and Mousley, Angela and Stewart, Michael and Maule, Aaron G. and Dalton, John P. and Donnelly, Sheila (2004) Cathepsin L1, the Major Protease Involved in Liver Fluke (Fasciola hepatica) Virulence. Journal of Biological Chemistry, 279 (17). pp. 17038-17046. ISSN 0021-9258

Collins, Aideen S. and Ahmed, Suaad and Napoletano, Silvia and Schroeder, Martina and Johnston, James A. and Hegarty, John E. and O'Farrelly, Cliona and Stevenson, Nigel J. (2014) Hepatitis C virus (HCV)-induced suppressor of cytokine signaling (SOCS) 3 regulates proinflammatory TNF-α responses. Journal of Leukocyte Biology, 96 (2). pp. 255-263. ISSN 0741-5400

Collins, Cassandra and Keane, Thomas M. and Turner, Daniel J. and O'Keefe, Grainne and Fitzpatrick, David A. and Doyle, Sean (2013) Genomic and Proteomic Dissection of the Ubiquitous Plant Pathogen, Armillaria mellea: Toward a New Infection Model System. Journal of Proteome Research, 12. pp. 2552-2570. ISSN 1535-3893

Cooney, David (2011) Possible Interacting Proteins for Retinol Binding Protein and Cellular Retinol Binding Protein. Masters thesis, National University of Ireland Maynooth.

Corcoran, A. and Doyle, Sean (2006) Human Parvovirus B19: Molecular Virology, Clinical Features, Prevalence, Diagnosis and Control. In: UNSPECIFIED Elsevier, pp. 173-209.

Corcoran, Amanda and Mahon, Bernard P. and Doyle, Sean (2004) B Cell Memory Is Directed toward Conformational Epitopes of Parvovirus B19 Capsid Proteins and the Unique Region of VP1. Journal of Infectious Diseases, 189 (10). pp. 1873-1880. ISSN 0022-1899

Corcoran, A. and Crowley, B. and Dewhurst, C. and Pizer, B.L. and Doyle, Sean (2006) Establishment of Functional B Cell Memory Against Parvovirus B19 Capsid Proteins May be Associated With Resolution of Persistent Infection. Journal of Medical Virology, 78 (1). pp. 125-128. ISSN 0146-6615

Corcoran, A. and Kerr, S. and Elliott, G. and Koppelman, M. and Doyle, Sean (2007) Improved detection of acute parvovirus B19 infection by immunoglobulin M EIA in combination with a novel antigen EIA. Vox Sanguinis, 96 (3). pp. 216-222. ISSN 0042-9007

Corcoran, Amanda and Doyle, Sean and Allain, J.P. and Candotti, D. and Parsyan, A. (2005) Letter to the Editor Evidence of Serological Cross-Reactivity between Genotype 1 and Genotype 3 Erythrovirus Infections. Journal of Virology, 79 (8). pp. 5238-5239.

Corcoran, Amanda and Doyle, Sean and Waldron, David and Nicholson, Alfred and Mahon, Bernard P. (2000) Impaired Gamma Interferon Responses against Parvovirus B19 by Recently Infected Children. Journal of Virology, 74 (21). pp. 9903-9910. ISSN 0022-538X

Costello, Anne and Herbert, Gillian and Fabunmi, Lydia and Schaffer, Kirsten and Kavanagh, Kevin A. and Caraher, Emma M. and Callaghan, Maire and McClean, Siobhan (2011) Virulence of an emerging respiratory pathogen, genus Pandoraea, in vivo and its interactions with lung epithelial cells. Journal of Medical Microbiology, 60 (3). pp. 289-299. ISSN 0022-2615

Cotter, Gary and Doyle, Sean and Kavanagh, Kevin (2000) Development of an insect model for the in vivo pathogenicity testing of yeasts. FEMS Immunology and Medical Microbiology, 27 (2). pp. 163-169. ISSN 0928-8244

Cotton, James A. and McInerney, James O. (2010) Eukaryotic genes of archaebacterial origin are more important than the more numerous eubacterial genes, irrespective of function. Proceedings of the National Academy of Sciences , 107 (40). pp. 17252-17255. ISSN 1091-6490

Coughlan, A. and Scanlon, K. and Mahon, B.P. and Towler, M.R. (2010) Zinc and silver glass polyalkenoate cements: An evaluation of their antibacterial nature. Bio-Medical Materials and Engineering, 20 (2). pp. 99-106. ISSN 0959-2989

Coughlan, Gillian (2015) Studies on the novel detection and destruction of the enteroparasite Giardia lamblia and other veterinary problematic microorganisms examined under varying culture conditions. Masters thesis, National University of Ireland Maynooth.

Coyle, Barry and Kinsella, Paula and McCann, Malachy and Devereux, Michael and O'Connor, Robert and Clynes, Martin and Kavanagh, Kevin (2004) Induction of apoptosis in yeast and mammalian cells by exposure to 1,10-phenanthroline metal complexes. Toxicology in Vitro, 18 (1). pp. 63-70.

Coyle, Barry and Kavanagh, Kevin and McCann, Malachy and Devereux, Michael and Geraghty, Majella (2003) Mode of anti-fungal activity of 1,10-phenanthroline and its Cu(II), Mn(II) and Ag(I) complexes. Biometals, 16. pp. 321-329. ISSN 0966-0844

Craig, W. and Gargano, Daniela and Scotti, Nunzia and Nguyen, T.T. and Lao, N.T. and Kavanagh, T.A. and Dix, Philip J. and Cardi, T. (2005) Direct gene transfer in potato: A comparison of particle bombardment of leaf explants and PEG-mediated transformation of protoplasts. Plant Cell Reports, 10. pp. 603-611. ISSN 0721-7714

Craig, Wendy and Lenzi, Paolo and Scotti, Nunzia and De Palma, Monica and Saggese, Paola and Carbone, Virginia and McGrath Curran, Noreen and Magee, Alan M. and Medgyesy, Peter and Kavanagh, Tony A. and Dix, Philip J. and Grillo, Stefania and Cardi, Teodoro (2008) Transplastomic tobacco plants expressing a fatty acid desaturase gene exhibit altered fatty acid profiles and improved cold tolerance. Transgenic Research, 17 (5). pp. 769-782. ISSN 0962-8819

Creaven, Bernadette and Egan, Denise and Kavanagh, Kevin and McCann, Malachy and Noble, Andy and Thati, Bhumika and Walsh, Maureen (2006) Synthesis, characterization and antimicrobial activity of a series of substituted coumarin-3-carboxylatosilver(1) complexes. Inorganica Chimica Acta, 359 (12). pp. 3976-3984.

Creaven, Bernadette S. and Duff, Brian and Egan, Denise A. and Kavanagh, Kevin and Rosair, Georgina and Reddy Thangellaa, Venkat and Walsh, Maureen (2010) Anticancer and antifungal activity of copper(II) complexes of quinolin-2(1H)-one-derived Schiff bases. Inorganica Chimica Acta, 363 (14). pp. 4048-4058. ISSN 0020-1693

Creaven, Bernadette S. and Egan, Denise A. and Kavanagh, Kevin and McCann, Malachy and Noble, Andy and Thati, Bhumika and Walsh, Maureen (2006) Synthesis, characterization and antimicrobial activity of a series of substituted coumarin-3-carboxylatosilver(I) complexes. Inorganica Chimica Acta.

Creaven, Bernadette S. and Egan, Denise A. and Kavanagh, Kevin and McCann, Malachy and Mahon, Mary and Noble, Andy and Thati, Bhumika and Walsh, Maureen (2005) Synthesis and antimicrobial activity of copper(II) and silver(I) complexes of hydroxynitrocoumarins: X-ray crystal structures of [Cu(hnc)2(H2O)2] Æ 2H2O and [Ag(hnc)] (hncH = 4-hydroxy-3-nitro-2H-chromen-2-one). Polyhedron, 24 (8). pp. 949-957. ISSN 0277-5387

Creevey, C.J. and McInerney, J.O. (2005) Clann: investigating phylogenetic information through supertree analyses. Bioinformatics, 21 (3). pp. 390-392.

Creevey, Christopher J. and Doerks, Tobias and Fitzpatrick, David A. and Raes, Jeroen and Bork, Peer (2011) Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer. PLoS ONE, 6 (8). ISSN 1932-6203

Creevey, Christopher J. and Fitzpatrick, David A. and Philip, Gayle K. and Kinsella, Rhoda J. and O'Connell, Mary J. and Pentony, Melissa M. and Travers, Simon A. and Wilkinson, Mark and McInerney, James O. (2004) Does a tree-like phylogeny only exist at the tips in the prokaryotes? Proceedings of The Royal Society of London, Biology Series, 271 (1557). pp. 2551-2558.

Culligan, Kevin and Banville, Niamh and Dowling, Paul and Ohlendieck, Kay (2002) Drastic reduction of calsequestrin-like proteins and impaired calcium binding in dystrophic mdx muscle. Journal of applied physiology, 92 (2). pp. 435-445. ISSN 8750-7587

Culligan, Kevin and Glover, Louise and Dowling, Paul and Ohlendieck, Kay (2001) Brain dystrophin-glycoprotein complex: persistent expression of beta-dystroglycan, impaired oligomerization of Dp71 and up-regulation of utrophins in animal models of muscular dystrophy. BMC Cell Biology, 2 (2). ISSN 1471-2121

Cumiskey, D. and Butler, M.P. and Moynagh, P.N. and O'Connor, J.J. (2007) Evidence for a role for the group I metabotropic glutamate receptor in the inhibitory effect of tumor necrosis factor-α on long-term potentiation. Brain Research, 1136. pp. 13-19. ISSN 0006-8993

Cummings, Michael P. and Nugent, Jacqueline M. and Olmstead, Richard G. and Palmer, Jeffrey D. (2003) Phylogenetic analysis reveals five independent transfers of the chloroplast gene rbcL to the mitochondrial genome in angiosperms. Current Genetics, 43 (2). pp. 131-138. ISSN 0172-8083

Cummins, Carla A. (2011) A new method for identifying site-specific evolutionary rates and its applications. PhD thesis, National University of Ireland Maynooth.

Cummins, E.P. and Berra, E. and Comerford, K.M. and Ginouves, A. and Fitzgerald, K.T. and Seeballuck, F. and Godson, C. and Nielsen, J.E. and Moynagh, P.N. and Pouyssegur, J. and Taylor, C.T. (2006) Prolyl hydroxylase-1 negatively regulates IκB kinase-β, giving insight into hypoxia-induced NFκB activity. Proceedings of the National Academy of Sciences, 103 (48). pp. 18154-18159. ISSN 1091-6490

Curran, Niamh and Griffin, Bryan D. and O'Toole, Daniel and Brady, Kevin J. and Fitzgerald, Stephen and Moynagh, Paul N. (2005) The Synthetic Cannabinoid R(+)WIN 55,212-2 Inhibits the Interleukin-1 Signaling Pathway in Human Astrocytes in a Cannabinoid Receptor-independent Manner. Journal of Biological Chemistry, 28 (43). pp. 35797-35806. ISSN 0021-9258

Cusack, Sarah (2010) Assessing the role of Hsp70 in prion propagation in Saccharomyces cerevisiae. PhD thesis, National University of Ireland Maynooth.

D

Dalton, John P. and O'Neill, Sandra M. and Stack, Colin M. and Collins, Peter R. and Walshe, Alan and Sekiya, Mary and Doyle, Sean and Mulcahy, Grace and Hoyle, Deborah and Khaznadji, Eric and Moire, Nathalie and Brennan, Gerard and Mousley, Angela and Kreshchenko, Natalia and Maule, Aaron G. and Donnelly, Sheila M. (2003) Fasciola hepatica cathepsin L-like proteases: biology, function, and potential in the development of first generation liver fluke vaccines. International Journal for Parasitology, 33 (11). pp. 1173-1181. ISSN 0020-7519

Daly, P. and Kavanagh, K. (2002) Immobilization of Aspergillus fumigatus colonies in a soft agar matrix allows visualization of A549 cell detachment and death. Medical Mycology, 40 (1). pp. 27-33. ISSN 1232-986X

Daly, Paul and Verhaegen, Steven and Clynes, Martin and Kavanagh, Kevin (1999) Culture filtrates of Aspergillus fumigatus induce different modes of cell death in human cancer cell lines. Mycopathologia, 146 (2). pp. 67-74. ISSN 0301-486X

Dang, Xiaodong (2012) Application of High Resolution Melting analysis for haplotype detection in phylogeographic research and case studies of Arenaria ciliata, A. norvegica and Minuartia recurva (Caryophyllaceae). PhD thesis, National University of Ireland Maynooth.

Davis, Carol (2011) The Glutathione S-Transferase GliG Mediates Gliotoxin Biosynthesis, not Self-Protection, in Aspergillus fumigatus: A Functional Genomic Investigation. PhD thesis, National University of Ireland Maynooth.

Davis, Carol and Carberry, Stephen and Schrettl, Markus and Singh, Ishwar and Stephens, John C. and Barry, Sarah M. and Kavanagh, Kevin and Challis, Gregory L. and Brougham, Dermot and Doyle, Sean (2011) The Role of Glutathione S-Transferase GliG in Gliotoxin Biosynthesis in Aspergillus fumigatus. Chemistry and Biology, 18. pp. 542-552. ISSN 1074-5521

Davis, Carol and Gordon, Natasha and Murphy, Sinead and Singh, Ishwar and Kavanagh, Kevin and Carberry, Stephen and Doyle, Sean (2011) Single-pot derivatisation strategy for enhanced gliotoxin detection by HPLC and MALDI-ToF mass spectrometry. Analytical and Bioanalytical Chemistry, 401 (8). pp. 2519-2529. ISSN 1618-2642

Deegan, Orla and Walshe, Kieran and Kavanagh, Kevin and Doyle, Sean (2003) Quantitative detection of C-reactive protein using phosphocholine-labelled enzyme or microspheres. Analytical Biochemistry, 312 (2). pp. 175-181. ISSN 0003-2697

Delobel, Arnaud and Graciet, Emanuelle and Andreescu, Simona and Gontero, Brigitte and Halgand, Frederic and Laprevote, Olivier (2005) Mass spectrometric analysis of the interactions between CP12, a chloroplast protein, and metal ions: a possible regulatory role within a PRK/GAPDH/CP12 complex. Rapid Communications in Mass Spectrometry, 19 (22). pp. 3379-3388. ISSN 1097-0231

Dempsey, Catherine M. and Griffin, Christine T. (2002) Phased activity in Heterorhabditis megidis infective juveniles. Parasitology, 124. pp. 605-613. ISSN 0031-1820

Dempsey, Catherine M. and Griffin, Christine T. (2003) The infectivity and behaviour of exsheathed and ensheathed Heterorhabditis megidis infective juveniles. Nematology, 5 (1). pp. 49-53. ISSN 1388-5545

Devereux, Michael and McCann, Malachy and O'Shea, Denis and Kelly, Rachel and Egan, Denise and Deegan, Carol and Kavanagh, Kevin and McKee, Vickie and Finn, Gregory J. (2004) Synthesis, antimicrobial activity and chemotherapeutic potential of inorganic derivatives of 2-(4’-thiazolyl)benzimazole {thiabendazole}: X-ray crystal structures of [Cu(TBZH)2Cl]Cl.H2O.EtOH and TBZH2NO3 (TBZH = thiabendazole). Journal of Inorganic Biochemistry, 98 (6). pp. 1023-1031. ISSN 0162-0134

Diekmann, Kerstin and Hodkinson, Trevor R. and Wolfe, Kenneth H. and Van Den Bekerom, Rob J.M. and Dix, Philip J. and Barth, Susanne (2009) Complete Chloroplast Genome Sequence of a Major Allogamous Forage Species, Perennial Ryegrass (Lolium perenne L.). DNA Research, 16. pp. 165-176. ISSN 1340-2838

Dillon, Aoife and Griffin, Christine (2008) Controlling the large pine weevil, Hylobius abietis, using natural enemies. COFORD Connects: Silviculture and Forest Management (15). pp. 1-8.

Dillon, Aoife B. and Foster, Aileen and Williams, Christopher D. and Griffin, Christine T. (2012) Environmental safety of entomopathogenic nematodes – Effects on abundance, diversity and community structure of non-target beetles in a forest ecosystem. Biological Control, 63 (2). pp. 107-114. ISSN 1049-9644

Dillon, Aoife B. and Ward, Declan and Downes, Martin J. and Griffin, Christine T. (2006) Suppression of the large pine weevil Hylobius abietis (L.) (Coleoptera: Curculionidae) in pine stumps by entomopathogenic nematodes with different foraging strategies. Biological Control, 38. pp. 217-226.

Dillon, A.B. and Rolston, A.N. and Meade, C.V. and Downes, M.J. and Griffin, C.T. (2008) Establishment, persistence, and introgression of entomopathogenic nematodes in a forest ecosystem. Ecological Applications, 18 (3). pp. 735-747. ISSN 1051-0761

Dillon, Aoife B. and Downes, Martin J. and Ward, Declan and Griffin, Christine T. (2007) Optimizing application of entomopathogenic nematodes to manage large pine weevil, Hylobius abietis L. (Coleoptera:Curculionidae) populations developing in pine stumps, Pinus sylvestris. Biological Control, 40 (2). pp. 253-263. ISSN 1049-9644

Dillon, Aoife B. and Moore, Colm P. and Downes, Martin J. and Griffin, Christine T. (2008) Evict or infect? Managing populations of the large pine weevil, Hylobius abietis, using a bottom–up and top–down approach. Forest Ecology and Management, 255 (7). pp. 2634-2642. ISSN 0378-1127

Ding, Chen and Yin, Jun and Tovar, Edgar Mauricio Medina and Fitzpatrick, David A. and Higgins, Desmond G. and Thiele, Dennis J. (2011) The Cu regulon of the human fungal pathogen Cryptococcus neoformans H99: Cuf1 activates distinct genes in response to both Cu excess and deficiency. Molecular Microbiology, 81 (6). pp. 1560-1576. ISSN 0950-382X

Dix, I. and Burnell, A.M. and Griffin, C.T. and Joyce, S.A. and Nugent, M.J. (1992) The identification of biological species in the genus Heterorhabditis (Nematoda : Heterorhabditidae) by cross-breeding second-generation amphimictic adults. Parasitology, 104. pp. 509-518.

Dix, Philip J. and Burbridge, E. and Diamond, M. and McCabe, P.F. (2006) Use of cell morphology to evaluate the effect of a peroxidase gene on cell death induction thresholds in tobacco. Plant Science, 171. pp. 138-146.

Dix, Philip J. (1977) Chilling Resistance is not Transmitted Sexually in Plants Regenerated from Nicotiana sylvestris Cell Lines. Zeitschrift für Pflanzenphysiologie, 84 (3). pp. 223-226. ISSN 0044-328X

Dix, Philip J. (1993) The role of mutant cell lines in studies on environmental stress tolerance: an assessment. The Plant Journal, 3 (2). pp. 309-313. ISSN 0960-7412

Dix, Philip J. and Pearce, R.S. (1981) Proline Accumulation in NaCI-resistant and Sensitive Cell Lines of Nicotiana sylvestris. Zeitschrift für Pflanzenphysiologie, 102 (3). pp. 243-248. ISSN 0044-328X

Dix, Philip J. and Street, H.E. (1974) Effects of p-Flourophenylalanine(PFP)on the Growth of Cell Lines Differing in Ploidy and Derived from Nicotiana Sylvestris. Plant Science Letters, 3. pp. 283-288. ISSN 0304-4211

Doherty, Aoife (2012) Increased genome sampling reveals novel insights into vertebrate molecular evolution. PhD thesis, National University of Ireland Maynooth.

Doherty, Derek and Arnaiz, Blanca and Madrigal-Estebas, Laura and Todryk, Stephen and James, Tharappel C and Bond, Ursula (2006) A novel method to identify and characterise peptide mimotopes of heat shock protein 70-associated antigens. Journal of Immune Based Therapies and Vaccines, 4 (2). pp. 1-12.

Dolan, K.M. and Jones, J.T. and Burnell, A.M. (2002) Detection of changes occurring during recovery from the dauer stage in Heterorhabditis bacteriophora. Parasitology, 125. pp. 71-81.

Dolan, Niamh and McGinley, John and Stephens, John C. and Kavanagh, Kevin and Hurley, Daniel and Maher, Niall (2014) Synthesis, characterisation and antimicrobial studies of organotin(IV) complexes with 1,10-phenanthroline derivatives. Inorganica Chimica Acta, 409 (Part B). pp. 276-284. ISSN 0020-1693

Dolan, Stephen K. and Owens, Rebecca A. and O'Keefe, Grainne and Hammel, Stephen and Fitzpatrick, David A. and Jones, Gary W. and Doyle, Sean (2014) Regulation of Nonribosomal Peptide Synthesis: bis-Thiomethylation Attenuates Gliotoxin Biosynthesis in Aspergillus fumigatus. Chemistry and Biology, 21 (8). pp. 999-2012. ISSN 1074-5521

Donoghue, Pamela and Doran, Philip and Dowling, Paul and Ohlendieck, Kay (2005) Differential expression of the fast skeletal muscle proteome following chronic low-frequency stimulation. Biochimica et Biophysica Acta - Proteins and Proteomics, 1752 (2). pp. 166-176. ISSN 1570-9639

Donoghue, Pamela and Doran, Philip and Wynne, Kieran and Federsen, Kasper and Dunn, Michael J. and Ohlendieck, Kay (2007) Proteomic profiling of chronic low-frequency stimulated fast muscle. Proteomics, 7 (18). pp. 3417-3430. ISSN 1615-9853

Donoghue, Pamela and Staunton, Lisa and Mullen, Edel and Manning, Gwen and Ohlendieck, Kay (2010) DIGE analysis of rat skeletal muscle proteins using nonionic detergent phase extraction of young adult versus aged gastrocnemius tissue. Journal of Proteomics, 73 (8). pp. 1441-1453. ISSN 1874-3919

Doran, Anthony Gerard (2013) Systems level investigation of the genetic basis of bovine muscle growth and development. PhD thesis, National University of Ireland Maynooth.

Doran, Philip and Donoghue, Pamela and O'Connell, Kathleen and Gannon, Joan and Ohlendieck, Kay (2007) Proteomic profiling of pathological and aged skeletal muscle fibres by peptide mass fingerprinting (Review). International Journal of Molecular Medicine, 19 (4). pp. 547-564. ISSN 1107-3756

Doran, Philip and Dowling, Paul and Donoghue, Pamela and Buffini, Maria and Ohlendieck, Kay (2006) Reduced expression of regucalcin in young and aged mdx diaphragm indicates abnormal cytosolic calcium handling in dystrophin-deficient muscle. Biochimica et Biophysica Acta - Proteins and Proteomics, 1764 (4). pp. 773-785. ISSN 1570-9639

Doran, Philip and Dowling, Paul and Lohan, James and McDonnell, Karen and Poetsch, Stephan and Ohlendieck, Kay (2004) Subproteomics analysis of Ca2+-binding proteins demonstrates decreased calsequestrin expression in dystrophic mouse skeletal muscle. European Journal of Biochemistry, 271 (19). pp. 3943-3952. ISSN 0014-2956

Doran, Philip and Gannon, Joan and O'Connell, Kathleen and Ohlendieck, Kay (2007) Aging skeletal muscle shows a drastic increase in the small heat shock proteins aB-crystallin/HspB5 and cvHsp/HspB7. European Journal of Cell Biology, 86 (10). pp. 629-640. ISSN 0171-9335

Doran, Philip and Gannon, Joan and O'Connell, Kathleen and Ohlendieck, Kay (2007) Proteomic profiling of animal models mimicking skeletal muscle disorders. Proteomics Clinical Applications, 1 (9). pp. 1169-1184. ISSN 1862-8346

Doran, Philip and Martin, Geraldine and Dowling, Paul and Jockusch, Harald and Ohlendieck, Kay (2006) Proteome analysis of the dystrophin-deficient MDX diaphragm reveals a drastic increase in the heat shock protein cvHSP. Proteomics, 6 (16). pp. 4610-4621. ISSN 1615-9853

Doran, Philip and O'Connell, Kathleen and Gannon, Joan and Kavanagh, Marcella and Ohlendieck, Kay (2008) Opposite pathobiochemical fate of pyruvate kinase and adenylate kinase in aged rat skeletal muscle as revealed by proteomic DIGE analysis. Proteomics, 8 (2). pp. 364-377. ISSN 1615-9853

Doran, Philip and Wilton, Steve D. and Fletcher, Sue and Ohlendieck, Kay (2009) Proteomic profiling of antisense-induced exon skipping reveals reversal of pathobiochemical abnormalities in dystrophic mdx diaphragm. Proteomics, 9 (3). pp. 671-685. ISSN 1615-9853

Dowling, Paul and Clarke, Colin and Hennessy, Kim and Torralbo-Lopez, Beatriz and Ballot, Jo and Crown, John and Kiernan, Ingrid and O'Byrne, Kenneth J. and Kennedy, M. John and Lynch, Vincent and Clynes, Martin (2012) Analysis of acute-phase proteins, AHSG, C3, CLI, HP and SAA, reveals distinctive expression patterns associated with breast, colorectal and lung cancer. International Journal of Cancer, 131 (4). pp. 911-923. ISSN 0020-7136

Dowling, Paul and Clynes, Martin (2011) Conditioned media from cell lines: A complementary model to clinical specimens for the discovery of diseasespecific biomarkers. Proteomics, 11 (4). pp. 794-804. ISSN 1615-9853

Dowling, Paul and Culligan, Kevin and Ohlendieck, Kay (2002) Distal mdx muscle groups exhibiting up-regulation of utrophin and rescue of dystrophin-associated glycoproteins exemplify a protected phenotype in muscular dystrophy. Naturwissenschaften, 89 (2). pp. 75-78. ISSN 0028-1042

Dowling, Paul and Doran, Philip and Lohan, James and Culligan, Kevin and Ohlendieck, Kay (2004) Naturally Protected Muscle Phenotypes: Development of Novel Treatment Strategies for Duchenne Muscular Dystrophy. Basic and applied myology : BAM, 14 (3). pp. 169-177. ISSN 1120-9992

Dowling, Paul and Doran, Philip and Ohlendieck, Kay (2004) Drastic reduction of sarcalumenin in Dp427 (dystrophin of 427 kDa)-deficient fibres indicates that abnormal calcium handling plays a key role in muscular dystrophy. Biochemical Journal, 379 (Pt.2). pp. 479-488. ISSN 0264-6021

Dowling, Paul and Holland, Ashling and Ohlendieck, Kay (2014) Mass Spectrometry-Based Identification of Muscle-Associated and Muscle-Derived Proteomic Biomarkers of Dystrophinopathies. Journal of Neuromuscular Diseases, 1 (1). pp. 15-40. ISSN 2214-3599

Dowling, Paul and Lohan, James and Ohlendieck, Kay (2003) Comparative analysis of Dp427-deficient mdx tissues shows that the milder dystrophic phenotype of extraocular and toe muscle fibres is associated with a persistent expression of beta-dystroglycan. European Journal of Cell Biology, 82 (5). pp. 222-230. ISSN 0171-9335

Dowling, Paul and Maurya, Priyanka and Meleady, Paula and Glynn, Sharon and Dowd, Andrew and Henry, Michael and Clynes, Martin (2007) Purification and Identification of a 7.6-kDa Protein in Media Conditioned by Superinvasive Cancer Cells. Anticancer Research, 27 (3A). pp. 1309-1317. ISSN 0250-7005

Dowling, Paul and Meleady, Paula and Dowd, Andrew and Henry, Michael and Glynn, Sharon and Clynes, Martin (2007) Proteomic analysis of isolated membrane fractions from superinvasive cancer cells. Biochimica et Biophysica Acta - Proteins and Proteomics, 1774 (1). pp. 93-101. ISSN 1570-9639

Dowling, Paul and O'Driscoll, Lorraine and Meleady, Paula and Henry, Michael and Roy, Shunil and Ballot, Jo and Moriarty, Michael and Crown, John and Clynes, Martin (2007) 2-D difference gel electrophoresis of the lung squamous cell carcinoma versus normal sera demonstrates consistent alterations in the levels of ten specific proteins. Electrophoresis, 28 (23). pp. 4302-4310. ISSN 0173-0835

Dowling, Paul and O'Driscoll, Lorraine and O'Sullivan, Finbarr and Dowd, Andrew and Henry, Michael and Jeppesen, Per Bendix and Meleady, Paula and Clynes, Martin (2006) Proteomic screening of glucose-responsive and glucose non-responsive MIN-6 beta cells reveals differential expression of proteins involved in protein folding, secretion and oxidative stress. Proteomics, 6 (24). pp. 6578-6587. ISSN 1615-9853

Dowling, Paul and Shields, William and Rani, Sweta and Meleady, Paula and Henry, Michael and Jeppesen, Per Bendix and O'Driscoll, Lorraine and Clynes, Martin (2008) Proteomic analysis of conditioned media from glucose responsive and glucose nonresponsive phenotypes reveals a panel of secreted proteins associated with beta cell dysfunction. Electrophoresis, 29 (20). pp. 4141-4149. ISSN 0173-0835

Dowling, Paul and Walsh, Naomi and Clynes, Martin (2008) Membrane and membrane-associated proteins involved in the aggressive phenotype displayed by highly invasive cancer cells. Proteomics, 8 (19). pp. 4054-4065. ISSN 1615-9853

Dowling, Paul and Wormald, Robert and Meleady, Paula and Henry, Michael and Curran, Aongus and Clynes, Martin (2008) Analysis of the saliva proteome from patients with head and neck squamous cell carcinoma reveals differences in abundance levels of proteins associated with tumour progression and metastasis. Journal of Proteomics, 71 (2). pp. 168-175. ISSN 1874-3919

Downer, Eric J. and Clifford, Eileen and Amu, Sylvie and Fallon, Padraic G. and Moynagh, Paul N. (2012) The Synthetic Cannabinoid R(+)WIN55,212-2 Augments Interferon-β Expression via Peroxisome Proliferator-activated Receptor-α. Journal of Biological Chemistry, 287 (30). pp. 25440-25453. ISSN 0021-9258

Downer, Eric J. and Clifford, Eileen and Gran, Bruno and Hendrik, J. Nel and Fallon, Padraig G. and Moynagh, Paul N. (2011) Identification of the Synthetic Cannabinoid R()WIN55,212-2 as a Novel Regulator of IFN Regulatory Factor 3 Activation and IFN- Expression. Journal of Biological Chemistry, 286 (12). pp. 10316-10328. ISSN 0021-9258

Downey, Liam and Lawlor, Bob and Quinn, Ciaran (2013) GSE1 Postgraduate Information Literacy and Communication Skills Training-Project Orientated Delivery. In: NUI Maynooth Teaching and Learning Showcase 2012/13, 8th May, 2013, NUI Maynooth. (Unpublished)

Doyle, Sean (2011) Fungal proteomics: from identitcation to function. Microbiology Letters, 321. pp. 1-9.

Doyle, Sean and Corcoran, Amanda (2006) The Immune Response to Parvovirus B19 Exposure in previously Seronegative and Seropositive Individuals. Journal of Infectious Diseases, 194 (2). pp. 154-158. ISSN 0022-1899

Doyle, Sean and Fox, M. and Gray, G. and Kavanagh, K. (2004) Detection of Aspergillus fumigatus mycotoxins: immunogen synthesis and immunoassay development. Journal of Microbiological Methods, 56 (2). pp. 221-230. ISSN 0167-7012

Doyle, Sean and Mahon, Bernard and Corcoran, A. and Daly, P. (2002) High-Sensitivity PCR Detection of Parvovirus B19 Plasma. Journal of Clinical Microbiology, 40 (6). pp. 1958-1962.

Doyle, Sarah L. and Shirey, Kari Ann and McGettrick, Anne F. and Kenny, Elaine F. and Carpenter, Susan B. and Caffrey, Brian E. and Gardan, Siobhan and Quinn, Susan R. and Cammano, Jorge H. and Moynagh, Paul N. and Vogel, Stefani N. and O'Neill, Luke A. (2013) NFκB2 p52 has a role in antiviral immunity through IKKε -dependent induction of Sp1 and IL-15. Journal of Biological Chemistry. ISSN 0021-9258

Doyle, Sean (2011) The Detection of Parvoviruses. Methods in Molecular Biology, 665. pp. 213-231. ISSN 1064-3745

Doyle, Sean and Corcoran, Amanda (2004) Advances in the biology, diagnosis and host-pathogen interactions of parvovirus B19. Journal of Medical Microbiology, 53. pp. 1-17.

Doyle, Sean and Daly, Paul (2003) The development of a competitive PCR-ELISA for the detection of equine herpesvirus-1. Journal of Virological Methods, 107 (2). pp. 237-244. ISSN 0166-0934

Doyle, Sean and Daly, Paul and Collier, T. (2002) PCR-ELISA detection of Escherichia coli in milk. Letters in Applied Microbiology, 34 (3). pp. 222-226. ISSN 0266-8254

Doyle, Sean and Kerr, S. and O'Keeffe, Grainne and O'Carroll, D. and Daly, P. and Kilty, C. (2000) Detection of parvovirus B19 IgM by antibody capture enzyme immunoassay: receiver operating characteristic analysis. Journal of Virological Methods, 90 (2). pp. 143-1522. ISSN 0166-0934

Doyle, Sean and Schininà, M.E. and Bossa, F. and Doonan, S. (1990) The amino acid sequence of cytosolic aspartate aminotransferase from human liver. Biochemical Journal, 270 (3). pp. 651-657. ISSN 0264-6021

Duffy, Ken R. and Subramanian, Vijay G. (2009) On the impact of correlation between collaterally consanguineous cells on lymphocyte population dynamics. Journal of Mathematical Biology, 59 (2). pp. 255-285. ISSN 1432-1416

Duffy, Brion and Holliger, E. and Walsh, Fiona (2014) Streptomycin use in apple orchards did not increase abundance of mobile resistance genes. FEMS Microbiology Letters, 350. pp. 180-189. ISSN 0378-1097

Duffy, C.P. and Elliott, C.J. and O'Connor, R.A. and Heenan, M.M. and Coyle, S. and Cleary, I.M. and Kavanagh, K. and Verhaegen, S. and O'Loughlin, C.M. and NicAmhlaoibh, R. and Clynes, M. (1998) Enhancement of chemotherapeutic drug toxicity to human tumour cells in vitro by a subset of non-steroidal anti-inflammatory drugs (NSAIDs). European Journal of Cancer, 34 (8). pp. 1250-1259. ISSN 0959-8049

Duffy, Michelle M. and Pindjakova, Jana and Hanley, Shirley A. and McCarthy, Cathal and Weidhofer, Gudrun A. and Sweeney, Eva M. and English, Karen and Shaw, Georgina and Murphy, J. Mary and Barry, Frank P. and Mahon, Bernard P. and Belton, Orina and Ceredig, Rhodri and Griffin, Matthew D. (2011) Mesenchymal stem cell inhibition of T-helper 17 cell- differentiation is triggered by cell–cell contact and mediated by prostaglandin E2 via the EP4 receptor. European Journal of Immunology, 41 (10). pp. 2840-2851. ISSN 1521-4141

Dunne, Aisling (2011) Can Plant Plastid Produce a Candidate Influenza Vaccine? PhD thesis, National University of Ireland Maynooth.

de Marchi, Rémi and Sorel, Maud and Mooney, Brian and Fudal, Isabelle and Goslin, Kevin and Kwasniewska, Kamila and Ryan, Patrick T. and Pfalz, Marina and Kroymann, Juergen and Pollmann, Stephan and Feechan, Angela and Wellmer, Frank and Rivas, Susana and Graciet, Emanuelle (2016) The N-end rule pathway regulates pathogen responses in plants. Scientific Reports, 13 (6). p. 26020. ISSN 2045-2322

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Ebssa, Lemma and Dix, Ilona and Griffin, Christine T. (2008) Female presence is required for male sexual maturity in the nematode Steinernema longicaudum. Current Biology, 18 (21). R997-R998. ISSN 0960-9822

Eckersall, P.D. and Duthie, S. and Safi, S. and Moffatt, D. and Horadagoda, N.U. and Doyle, Sean and Parton, R. and Bennett, D. and Fitzpatrick, J.L. (1999) An automated biochemical assay for haptoglobin: prevention of interference from albumin. Comparative Haematology International, 9 (3). pp. 117-124. ISSN 0938-7714

Egan, Brendan and Dowling, Paul and O'Connor, Paul L. and Henry, Michael and Meleady, Paula and Zierath, Juleen R. and O'Gorman, Donal J. (2011) 2-D DIGE analysis of the mitochondrial proteome from human skeletal muscle reveals time coursedependent remodelling in response to 14 consecutive days of endurance exercise training. Proteomics, 11 (8). pp. 1413-1428. ISSN 1615-9853

Eissing, Thomas and Waldherr, Steffen and Gondro, Cedric and Bullinger, Eric and Sawodny, Oliver and Allgöwer, Frank and Scheurich, Peter and Sauter, Thomas (2006) Sensitivity analysis of programmed cell death and implications for crosstalk phenomena during Tumor Necrosis Factor stimulation. In: Proceedings of the 2006 IEEE International Conference on Control Applications Munich, Germany, October 4-6, 2006. IEEE, pp. 1746-1752. ISBN 0-7803-9797-5

Eivazian Kary, Naser and Niknam, Gholamreza and Griffin, Christine T. and Mohammadi, Seyed Abolgasem and Moghaddam, Mohammad (2009) A survey of entomopathogenic nematodes of the families Steinernematidae and Heterorhabditidae (Nematoda: Rhabditida) in the north-west of Iran. Nematology, 11 (1). pp. 107-116. ISSN 1388-5545

Ellabib, M.S. and Agaj, M. and Khalifa, Z. and Kavanagh, K. (2002) Yeasts of the genus Candida are the dominant cause of onychomycosis in Libyan women but not men: results of a 2-year surveillance study. British Journal of Dermatology, 146 (6). pp. 1038-1041. ISSN 0007-0963

Ellabib, M.S. and Agaj, M. and Khalifa, Z. and Kavanagh, Kevin (2001) Trichophyton violaceum is the dominant cause of tinea capitis in children in Tripoli, Libya: Results of a two year survey. Mycopathologia, 153. pp. 145-147. ISSN 0301-486X

Ellabib, M.S. and Khalifa, Z. and Kavanagh, K. (2002) Dermatophytes and other fungi associated with skin mycoses in Tripoli, Libya. Mycoses, 45 (3-4). pp. 101-104. ISSN 0933-7407

English, Karen and Barry, Frank P. and Mahon, Bernard P. (2008) Murine mesenchymal stem cells suppress dendritic cell migration, maturation and antigen presentation. Immunology Letters, 115. pp. 50-58.

English, Karen and Brady, Claire and Corcoran, Paul and Cassidy, Joseph P. and Mahon, Bernard P. (2006) Inflammation of the respiratory tract is associated with CCL28 and CCR10 expression in a murine model of allergic asthma. Immunology Letters, 103 (2). pp. 92-100. ISSN 0165-2478

English, Karen (2013) Mechanisms of mesenchymal stromal cell immunomodulation. Immunology and Cell Biology, 91. pp. 19-26. ISSN 1440-1711

English, Karen and Barry, Frank P. and Field-Corbett, Ciara and Mahon, Bernard P. (2007) IFN-y and TNF-x differentially regulate immunomodulation by murine mesenchymal stem cells. Immunology Letters, 110. pp. 91-100. ISSN 1879-0542

English, Karen and French, Anna and Wood, Kathryn J. (2010) Mesenchymal Stromal Cells: Facilitators of Successful Transplantation? Cell Stem Cell, 7. pp. 431-442. ISSN 1875-9777

English, Karen and Mahon, Bernard P. (2011) Allogeneic Mesenchymal Stem Cells: Agents of Immune Modulation. Journal of Cellular Biochemistry, 112. pp. 1963-1968. ISSN 1097-4644

English, Karen and Mahon, Bernard P. and Wood, Kathryn J. (2014) Mesenchymal Stromal Cells; Role in Tissue Repair, Drug Discovery and Immune Modulation. Current Drug Delivery, 11 (5). pp. 561-571. ISSN 1567-2018

English, Karen and Ryan, J.M. and Tobin, L. and Murphy, M.J. and Barry, F.P. and Mahon, B.P. (2009) Cell contact, prostaglandin E2 and transforming growth factor beta 1 play non-redundant roles in human mesenchymal stem cell induction of CD4+CD25High forkhead box P3+ regulatory T cells. Clinical and Experimental Immunology, 156. pp. 149-160.

English, Karen and Tonlorenzi, Rossana and Cossu, Giulio and Wood, Kathryn J (2013) Mesoangioblasts Suppress T Cell Proliferation Through IDO and PGE-2-Dependent Pathways. Stem Cells and Development, 22 (3). pp. 512-523. ISSN 1547-3287

Ennis, D.P. and Cassidy, J.P. and Mahon, B.P. (2004) Prior Bordetella pertussis infection modulates allergen priming and the severity of airway pathology in a murine model of allergic asthma. Clinical and Experimental Allergy, 34. pp. 1488-1497.

Ennis, Darragh (2009) Behavioural interactions between the large pine weevil, Hylobius abietis L.(Coleoptera: Curculionidae), and entomopathogenic nematodes. PhD thesis, National University of Ireland Maynooth.

Ennis, Darragh E. and Dillon, Aoife B. and Griffin, Christine T. (2010) Pine weevils modulate defensive behaviour in response to parasites of differing virulence. Animal Behaviour, 80. pp. 283-288. ISSN 0003-3472

Ennis, Darren P. and Cassidy, Joseph P. and Mahon, Bernard P. (2005) Acellular Pertussis Vaccine Protects against Exacerbation of Allergic Asthma Due to Bordetella pertussis in a Murine Model. Clinical and Diagnostic Laboratory Immunology, 12. pp. 409-417.

Ennis, D.P. and Dillon, A.B. and Griffin, C.T. (2010) Simulated roots and host feeding enhance infection of subterranean insects by the entomopathogenic nematode Steinernema carpocapsae. Journal of Invertebrate Pathology, 103 (2). pp. 140-143. ISSN 0022-2011

Ennis, Darren P. and Cassidy, Joseph P. and Mahon, Bernard P. (2005) Whole-cell pertussis vaccine protects against Bordetella pertussis exacerbation of allergic asthma. Immunology Letters, 97. pp. 91-100.

Ennisa, Darren P. and Cassidy, Joseph P. and Mahon, Bernard P. (2004) Whole-cell pertussis vaccine protects against Bordetella pertussis exacerbation of allergic asthma. Immunology Letters, 97 (1). pp. 91-100.

Enright, M.R. and Griffin, C.T. (2004) Specificity of Association between Paenibacillus spp. and the Entomopathogenic Nematodes, Heterorhabditis spp. Microbial Ecology, 48. pp. 412-421.

Enright, Michael R. and Griffin, C.T. (2005) Effects of Paenibacillus nematophilus on the entomopathogenic nematode Heterorhabditis megidis. Journal of Invertebrate Pathology, 88. pp. 40-48.

Enright, Michael R. and McInerney, James O. and Griffin, Christine T. (2003) Characterization of endospore-forming bacteria associated with entomopathogenic nematodes, Heterorhabditis spp., and description of Paenibacillus nematophilus sp. nov. International Journal of Systematic and Evolutionary Microbiology, 53. pp. 435-441. ISSN 1466-5026

Eshwika, Ahmed and Coyle, Barry and Devereux, Michael and McCann, Malachy and Kavanagh, Kevin (2004) Metal complexes of 1,10-phenanthroline-5,6-dione alter the susceptibility of the yeast Candida albicans to Amphotericin B and Miconazole. Biometals, 17. pp. 415-422.

Eshwika, Ahmed and Kelly, Judy and Fallon, John P. and Kavanagh, Kevin (2013) Exposure of Aspergillus fumigatus to caspofungin results in the release, and de novo biosynthesis, of gliotoxin. Medical Mycology, 51. pp. 121-127. ISSN 1232-986X

Eshwika, Ahmed (2014) An Analysis of the Response of Aspergillus fumigatus and Candida albicans to Caspofungin. PhD thesis, National University of Ireland Maynooth.

Eustace, Alex J. and Dowling, Paul and Henry, Michael and Doolan, Padraig and Meleady, Paula and Clynes, Martin and Crown, John and O'Donovan, Norma (2011) 2D-DIGE analysis of phospho-enriched fractions from dasatinib-treated melanoma cell lines. Journal of Proteomics, 74 (4). pp. 490-501. ISSN 1874-3919

Everard, A. and Griffin, C.T. and Dillon, A.B. (2009) Competition and intraguild predation between the braconid parasitoid Bracon hylobii and the entomopathogenic nematode Heterorhabditis downesi, natural enemies of the large pine weevil, Hylobius abietis. Bulletin of Entomological Research, 99. pp. 151-161. ISSN 0007-4853

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Fallon, John (2010) An analysis of the interaction of environmental and clinical isolates of Aspergillus fumigatus with vertebrate and invertebrate immune responses. PhD thesis, National University of Ireland Maynooth.

Fallon, John P. and Reeves, Emer P. and Kavanagh, Kevin (2010) Inhibition of neutrophil function following exposure to the Aspergillus fumigatus toxin fumagillin. Journal of Medical Microbiology, 59 (6). pp. 625-633. ISSN 0022-2615

Fallon, John P. and Reeves, Emer P. and Kavanagh, Kevin (2011) The Aspergillus fumigatus toxin fumagillin suppresses the immune response of Galleria mellonella larvae by inhibiting the action of haemocytes. Microbiology, 157 (5). pp. 1481-1488. ISSN 1465-2080

Fallon, John P. and Troy, Niamh and Kavanagh, Kevin (2011) Pre-exposure of Galleria mellonella larvae to different doses of Aspergillus fumigatus conidia causes differential activation of cellular and humoral immune responses. Virulence, 2 (5). pp. 413-425. ISSN 2150-5594

Fares, Mario Ali and Moya, Andres and Barrio, Eladio (2004) GroEL and the maintenance of bacterial endosymbiosis. Trends in Genetics, 20 (9). pp. 413-416.

Fares, Mario A. (2004) SWAPSC: sliding window analysis procedure to detect selective constraints. Bioinformatics, 20 (16). pp. 2867-2868.

Fares, Mario A. and Keane, Orla M. and Toft, Christina and Carretero-Paulet, Lorenzo and Jones, Gary W. (2013) The Roles of Whole-Genome and Small-Scale Duplications in the Functional Specialization of Saccharomyces cerevisiae Genes. PLos Genetics, 9 (1). e1003176. ISSN 1553-7390

Farina, Marcello and Findeisen, Rolf and Bullinger, Eric and Bittanti, Sergio and Allgöwer, Frank and Wellstead, Peter (2006) Results Towards Identifiability Properties of Biochemical Reaction Networks. In: 45th IEEE Conference on Decision & Control Manchester Grand Hyatt Hotel San Diego, CA, USA, December 13-15, 2006. IEEE, pp. 2104-2109. ISBN 1-4244-0171-2

Ferreira, Jorge and Middleton, Rick (2008) An in-silico analysis of the SMART study of HIV infection. IFAC Symposia Series.

Ferreira, Jorge and Middleton, Rick (2008) An in-silico analysis of the SMART study of HIV infection. In: 7th IFAC Symposium on Modelling and Control, November 2008.

Feuda, Roberto (2012) Comparative genomics of early animal evolution. PhD thesis, National University of Ireland Maynooth.

Feuda, Roberto and Hamilton, Sinead C. and McInerney, James O. and Pisani, Davide (2012) Metazoan opsin evolution reveals a simple route to animal vision. Proceedings of the National Academy of Sciences . ISSN 1091-6490

Finnegan, Michelle and Downes, Martin J. and O'Regan, Myra and Griffin, Christine T. (1999) Effect of salt and temperature stresses on survival and infectivity of Heterorhabditis spp. IJs. Nematology, 1 (1). pp. 69-78. ISSN 1388-5545

Fisher, John F. and Kavanagh, Kevin and Sobel, Jack D. and Kauffman, Carol A. and Newman, Cheryl A. (2011) Candida Urinary Tract Infection: Pathogenesis. Clinical Infectious Diseases, 52 (S6). S437-S451. ISSN 1058-4838

Fitters, Paul F.L. and Griffin, Christine T. (2004) Spontaneous and induced activity of Heterorhabditis megidis infective juveniles during storage. Nematology, 6. pp. 911-917.

Fitters, Paul F.L. and Griffin, Christine T. (2006) Survival, starvation, and activity in Heterorhabditis megidis (Nematoda: Heterorhabditidae). Biological Control, 37. pp. 82-88.

Fitters, Paul F.L. and Dunne, R. and Griffin, C.T. (2001) Vine Weevil Control in Ireland with Entomopathogenic Nematodes: Optimal Time of Application. Irish Journal of Agricultural and Food Research, 40 (2). pp. 199-213. ISSN 07916833

Fitters, Paul F.L. and Patel, Mavji N. and Griffin, Christine T. and Wright, Denis J. (1999) Fatty acid composition of Heterorhabditis sp. during storage. Comparative Biochemistry and Physiology Part B, 124 (1). pp. 81-88. ISSN 0010-406X

Fitzpatrick, David A. (2011) Horizontal gene transfer in fungi. Microbiology Letters.

Fitzpatrick, David A. and Creevey, Christopher J. and McInerney, James O. (2006) Genome Phylogenies Indicate a Meaningful a-Proteobacterial Phylogeny and Support a Grouping of the Mitochondria with the Rickettsiales. Molecular Biology and Evolution, 23 (1). pp. 74-85.

Fitzpatrick, David A. and Logue, Mary E. and Butler, Geraldine (2008) Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis. BMC Evolutionary Biology, 8. pp. 181-195. ISSN 1471-2148

Fitzpatrick, David A. and Logue, Mary E. and Stajich, Jason E. and Butler, Geraldine (2006) A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis. BMC Evolutionary Biology, 6. pp. 99-113. ISSN 1471-2148

Fitzpatrick, David A. and McInerney, James O. (2005) Evidence of Positive Darwinian Selection in Omp85, a Highly Conserved Bacterial Outer Membrane Protein Essential for Cell Viability. Journal of Molecular Evolution, 61 (1). pp. 90-98.

Fitzpatrick, David A. and O'Gaora, Peadar and Byrne, Kevin P. and Butler, Geraldine (2010) Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser. BMC Genomics, 11 (290). pp. 1-14. ISSN 1471-2164

Fitzpatrick, David A. and O'Halloran, Damien M. (2012) Investigating the Relationship between Topology and Evolution in a Dynamic Nematode Odor Genetic Network. International Journal of Evolutionary Biology, 2012 (548081). ISSN 2090-052X

Fitzpatrick, David A. and O'Halloran, Damien M. and Burnell, Ann M. (2006) Multiple lineage specific expansions within the guanylyl cyclase gene family. BMC Evolutionary Biology, 6. pp. 26-43. ISSN 1471-2148

Fitzpatrick, David A. (2009) Lines of Evidence for Horizontal Gene Transfer of a Phenazine Producing Operon into Multiple Bacterial Species. Journal of Molecular Evolution, 68 (2). pp. 171-185. ISSN 0022-2844

Fitzpatrick, David A. and O'Brien, Jennifer and Moran, Ciara and Hasin, Naushaba and Kenny, Elaine and Cormican, Paul and Gates, Amy and Morris, Derek W. and Jones, Gary W. (2011) Assessment of Inactivating Stop Codon Mutations in Forty Saccharomyces cerevisiae Strains: Implications for [PSI+] Prion-Mediated Phenotypes. PLoS ONE, 6 (12). e28684. ISSN 1932-6203

Flannery, Marie-Louise and Meade, Conor and Mullins, Ewen (2005) Employing a composite gene-flow index to numerically quantify a crop’s potential for gene flow: an Irish perspective. Environmental Biosafety Research, 4 (1). pp. 29-43. ISSN 1635-7922

Flendring, Leonard M. and Chamuleau, Robert A.F.M. and Maas, Martinus A.W. and Daalhuisen, Joost and Hasset, Brian and Kilty, Cormac G. and Doyle, Sean and Ladiges, Nita C.J.J. and Jörning, George G.A. and la Soe, John W. and Sommeijer, Dirkje and te Velde, Anje A. (1999) Evaluation of a novel bioartificial liver in rats with complete liver ischemia: treatment efficacy and species-specific alpha-GST detection to monitor hepatocyte viability. Journal of Hepatology, 30 (2). pp. 311-321. ISSN 0168-8278

Flynn, Marion A. and Casey, David G. and Todryk, Stephen M. and Mahon, Bernard P. (2004) Efficient delivery of small interfering RNA for inhibition of IL-12p40 expression in vivo. Journal of Inflammation, 1 (4). pp. 1-12.

Flynn, Ciara (2014) Nocturnal Lepidoptera of Midland Raised Bogs. Masters thesis, National University of Ireland Maynooth.

Fouhy, Fiona and Stanton, Catherine and Cotter, Paul D. and Hill, Colin and Walsh, Fiona (2015) Proteomics as the final step in the functional metagenomics study of antimicrobial resistance. Frontiers in Microbiology, 6 (172). pp. 1-6. ISSN 1664-302X

Franquesa, Marcella and Hoogduijn, Martin J. and Reinders, Marlies E. and Eggenhofer, Elke and Engela, Anja U. and Mensah, Fane K. and Torras, Joan and Pileggi, Antonello and van Kooten, Cees and Mahon, Bernard and Detry, Oliver and Popp, Felix C. and Benseler, Volker and Casiraghi, Federica and Johnson, Christian and Ancans, Janis and Fillenberg, Barbara and delaRosa, Olga and Aran, Josep M. and Roemeling-van Rhijn, Marieke and Pinxteren, Jef and Perico, Norberto and Gotti, Eliana and Christ, Bruno and Reading, James and Introna, Martino and Deans, Robert and Shagidulin, Murat and Farré, Ramon and Rambaldi, Alessandro and Sanchez-Fueyo, Albert and Obermajer, Natasha and Pulin, Audrey and Dor, Frank J.M.F. and Portero-Sanchez, Isabel and Baan, Carla C. and Rabelink, Ton J. and Remuzzi, Giuseppe and Betjes, Michiel G.H. and Dahlke, Marc H. and Grinyó, Josep M. (2013) Mesenchymal Stem Cells in Solid Organ Transplantation (MiSOT) 4th meeting: Lessons learned from first clinical trials. Transplantation, 96 (3). pp. 234-238. ISSN 0041-1337

Fullam, Anthony (2013) The role of the DEAD box Helicase DDX3X in Anti-­‐Viral Signalling Pathways Mediated by the Kinase IKKα. PhD thesis, National University of Ireland Maynooth.

Fullam, Anthony and Schroeder, Martina (2013) DExD/H-box RNA helicases as mediators of anti-viral innate immunity and essential host factors for viral replication. Molecular and Cellular Biology, 1829. pp. 854-865. ISSN 0270-7306

Fullam, Anthony and Schroeder, Martina (2013) DExD/H-box RNA helicases as mediators of anti-viral innate immunity and essential host factors for viral replication. Biochimica et Biophysica Acta, 1829 (8). pp. 854-865. ISSN 1874-9399

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Gaffney, Mark and Carberry, Stephen and Doyle, Sean and Murphy, Richard (2009) Purification and characterisation of a xylanase from Thermomyces lanuginosus and its functional expression by Pichia pastoris. Enzyme and Microbial Technology, 45 (5). pp. 348-354. ISSN 0141-0229

Gaffney, Mark and Doyle, Sean and Murphy, Richard (2009) Optimization of Xylanase Production by Thermomyces Ianuginosus in Solid State Fermentation. Bioscience, Biotechnology, and Biochemistry, 74 (12). pp. 2640-2644. ISSN 0916-8451

Gallagher, Lorna (2010) Functional Genomic Analysis of Natural Product Biosynthesis and Secretion in Aspergillus fumigatus. PhD thesis, National University of Ireland Maynooth.

Gallagher, Lorna and Owens, Rebecca A. and Dolan, Stephen K. and O'Keefe, Grainne and Schrettl, Markus and Kavanagh, Kevin and Jones, Gary W. and Doyle, Sean (2012) The Aspergillus fumigatus Protein GliK Protects against Oxidative Stress and Is Essential for Gliotoxin Biosynthesis. Eukaryotic Cell, 11 (10). pp. 1226-1238. ISSN 1535-9778

Gannon, Jay and Ohlendieck, Kay (2012) Subproteomic analysis of basic proteins in aged skeletal muscle following offgel pre-fractionation. Molecular Medicine Reports, 5 (4). pp. 993-1000. ISSN 1791-2997

Gannon, Joan and Doran, Philip and Kirwan, Anne and Ohlendieck, Kay (2009) Drastic increase of myosin light chain MLC-2 in senescent skeletal muscle indicates fast-to-slow fibre transition in sarcopenia of old age. European Journal of Cell Biology, 88 (11). pp. 685-700. ISSN 0171-9335

Gannon, Joan and Staunton, Lisa and O'Connell, Kathleen and Doran, Philip and Ohlendieck, Kay (2008) Phosphoproteomic analysis of aged skeletal muscle. International Journal of Molecular Medicine, 22 (1). pp. 33-42. ISSN 1107-3756

Gargan, Siobhan (2011) Probing the Mechanisms Underlying the Regulatory Effects of Cactin in Innate Immune Signalling Pathways. PhD thesis, National University of Ireland Maynooth.

Garland, M.R. and Lavelle, E and Doherty, D and Golden-Mason, L. and Fitzpatrick, P and Hill, A and Walsh, N and O'Farrelly, C (2004) Cortisol does not mediate the suppressive effects of psychiatric morbidity on natural killer cell activity: a cross-sectional study of patients with early breast cancer. Psychological Medicine, 34 (3). pp. 481-490.

Geraghty, Patrick and Kavanagh, Kevin (2003) Erythromycin, an inhibitor of mitoribosomal protein biosynthesis, alters the amphotericin B susceptibility of Candida albicans. Journal of Pharmacy and Pharmacology, 55 (2). pp. 179-184.

Geraghty, Patrick and Kavanagh, Kevin (2003) Disruption of mitochondrial function in Candida albicans leads to reduced cellular ergosterol levels and elevated growth in the presence of amphotericin B. Archives of Microbiology, 179 (4). pp. 295-300. ISSN 0302-8933

Gerke, Jennifer and Bayram, Ozgur and Braus, Gerhard H. (2012) Fungal S-adenosylmethionine synthetase and the control of development and secondary metabolism in Aspergillus nidulans. Fungal Genetics and Biology, 49. pp. 443-454. ISSN 1087-1845

Gerke, Jennifer and Bayram, Ozgur and Feussner, Kirstin and Landesfeind, Manuel and Shelest, Ekaterina and Feussner, Ivo and Braus, Gerhard H. (2012) Breaking the Silence: Protein Stabilization Uncovers Silenced Biosynthetic Gene Clusters in the Fungus Aspergillus nidulans. Applied and Environmental Microbiology, 78 (23). pp. 8234-8244. ISSN 0099-2240

Gibbs, Richard A. and Kovar, Christie and Fowler, Gerald R. and Nazareth, Lynne V. and Atsushi, Nakabachi and Worley, Kim C. and Tagu, Denis and Richards, Stephen and Gabaldon, Toni and Rispe, Claude and Quesneville, Hadi and Douglas, Angela and Shigenobu, Shuji and Moran, Nancy and Barribeau, Seth M. and Gerardo, Nichole M. and Ghanim, Murad and Chang, Chun-che and Davis, Gregory K. and Rider Jr., Stanley Dean and Walsh, Thomas K. and Brisson, Jennifer A. and Miura, Toru and Srinivasan, Dayalan and Willson, Alex C.C. and Jaubert-Possamai, Stephanie and Robertson, Hugh M. and Field, Linda M. and Jander, Georg and Carolan, James C. and Edwards, Owain R. and Tamborindeguy, Cecilia and Martinez-Torres, David and Dale, Richard P. and Charles, Hubert (2010) Genome Sequence of the Pea Aphid Acyrthosiphon pisum. PLoS Biology, 8 (2). e1000313. ISSN 1545-7885

Gilbert, Jennifer L. (2009) The Role of Bone Morphogenetic Protein (BMP) Signalling in Lung Cancer and Lung Regeneration. PhD thesis, National University of Ireland Maynooth.

Gildea, Sarah and Fitzpatrick, David A. and Cullinane, Ann (2013) Epidemiological and virological investigations of equine influenza outbreaks in Ireland (2010–2012). Influenza and Other Respiratory Viruses, 7 (S.4). pp. 61-74. ISSN 1750-2659

Girling, R.D. and Ennis, D. and Dillon, A.B. and Griffin, C.T. (2010) The lethal and sub-lethal consequences of entomopathogenic nematode infestation and exposure for adult pine weevils, Hylobius abietis (Coleoptera: Curculionidae). Journal of Invertebrate Pathology, 104 (3). pp. 195-202. ISSN 0022-2011

Glover, Louise and Heffron, James J.A. and Ohlendieck, Kay (2004) Increased sensitivity of the ryanodine receptor to halothane-induced oligomerization in malignant hyperthermia-susceptible human skeletal muscle. Journal of applied physiology, 96 (1). pp. 11-18. ISSN 8750-7587

Glover, Louise and Ohlendieck, Kay (2004) Illustration of Skeletal Muscle Calsequestrin Complex Formation by Cell Overlay and Two-Dimensional Blot Overlay Methodology. Basic and Applied Myology, 14 (4). pp. 231-241. ISSN 1120-9992

Glover, Louise and Quinn, Sandra and Ryan, Michelle and Pette, Dirk and Ohlendieck, Kay (2002) Supramolecular calsequestrin complex : Protein–protein interactions in chronic low-frequency stimulated muscle, postnatal development and ageing. European Journal of Biochemistry, 269 (18). pp. 4607-4616. ISSN 0014-2956

Gonzalez-Rabade, Nuria and McGowan, Edward G. and Zhou, Fei and McCabe, Matthew and Bock, Ralph and Dix, Philip J. and Gray, John C. and Ma, Julian K-C. (2011) Immunogenicity of chloroplast-derived HIV-1 p24 and a p24-Nef fusion protein following subcutaneous and oral administration in mice. Plant Biotechnology Journal, 9 (6). pp. 629-638. ISSN 1467-7644

Goyal, K. and Browne, J.A. and Burnell, A.M. and Tunnacliffe, A. (2005) Dehydration-induced tps gene transcripts from an anhydrobiotic nematode contain novel spliced leaders and encode atypical GT-20 family proteins. Biochimie, 87. pp. 565-574.

Goyal, Kshamata and Tisi, Laurence and Basran, Amrik and Browne, John and Burnell, Ann and Zurdo, Jesus and Tunnacliffe, Alan (2003) Transition from Natively Unfolded to Folded State Induced by Desiccation in an Anhydrobiotic Nematode Protein. The Journal of Biological Chemistry, 278 (15). pp. 12977-12984.

Graciet, Emanuelle and Gans, Pierre and Wedel, Norbert and Lebreton, Sandrine and Camadro, Jean-Michel and Gontero, Brigitte (2003) The Small Protein CP12: A Protein Linker for Supramolecular Complex Assembly. Biochemistry, 42 (27). pp. 8163-8170. ISSN 0006-2960

Graciet, Emanuelle and Hu, Rong-Gui and Piatkov, Konstantin and Rhee, Joon Haeng and Schwarz, Erich M. and Varshavsky, Alexander (2006) Aminoacyl-transferases and the N-end rule pathway of prokaryotic/eukaryotic specificity in a human pathogen. Proceedings of the National Academy of Sciences, 103 (9). pp. 3078-3083. ISSN 1091-6490

Graciet, Emanuelle and Lebreton, Sandrine and Camadro, Jean-Michel and Gontero, Brigitte (2003) Characterization of native and recombinant A4 glyceraldehyde 3-phosphate dehydrogenase. Kinetic evidence for conformation changes upon association with the small protein CP12. European Journal of Biochemistry, 270 (1). pp. 129-136. ISSN 0014-2956

Graciet, Emanuelle and Lebreton, Sandrine and Camadro, Jean-Michel and Gontero, Brigitte (2002) Thermodynamic Analysis of the Emergence of New Regulatory Properties in a Phosphoribulokinase-Glyceraldehyde 3-Phosphate Dehydrogenase Complex. Journal of Biological Chemistry, 277 (15). pp. 12697-12702. ISSN 0021-9258

Graciet, Emanuelle and Lebreton, Sandrine and Gontero, Brigitte (2004) Emergence of new regulatory mechanisms in the Benson-Calvin pathway via protein-protein interactions: a glyceraldehyde-3-phosphate dehydrogenase/CP12/phosphoribulokinase complex. Journal of Experimental Botany, 55 (400). pp. 1245-1254. ISSN 0022-0957

Graciet, Emanuelle and Mesiti, Francesca and Wellmer, Frank (2010) Structure and evolutionary conservation of the plant N-end rule pathway. The Plant Journal, 61. pp. 741-751. ISSN 0960-7412

Graciet, Emanuelle and Mulliert, Guillermo and Lebreton, Sandrine and Gontero, Brigitte (2004) Involvement of two positively charged residues of Chlamydomonas reinhardtii glyceraldehyde-3-phosphate dehydrogenase in the assembly process of a bi-enzyme complex involved in CO2 assimilation. European Journal of Biochemistry, 271 (23-24). pp. 4737-4744. ISSN 0014-2956

Graciet, Emanuelle and Walter, Franziska and O'Maoileidigh, Diarmuid and Pollmann, Stephan and Meyerowitz, Elliot M. and Varshavsky, Alexander and Wellmer, Frank (2009) The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf development. Proceedings of the National Academy of Sciences, 106 (32). pp. 13618-13623. ISSN 1091-6490

Grant, Olga M. and Brennan, Donal P. and Mellisho Salas, Carmen D. and Dix, Philip J. (2014) Impact of Enhanced Capacity to Scavenge Reactive Oxygen Species on Cold Tolerance of Tobacco. International Journal of Plant Sciences, 175 (5). pp. 544-554. ISSN 1058-5893

Griffin, Bryan D. and Mellett, Mark and Campos-Torres, Antonio and Kinsella, Gemma K. and Wang, Bingwei and Moynagh, Paul N. (2011) A poxviral homolog of the Pellino protein inhibits Toll and Toll-like receptor signalling. European Journal of Immunology, 41 (3). pp. 798-812.

Griffin, C.T. and Boemare, N.E. and Lewis, E.E. (2005) Biology and Behaviour. In: Nematodes as biocontrol agents. CAB International, pp. 47-64. ISBN 0851990177

Griffin, Christine T. (2012) Perspectives on the Behavior of Entomopathogenic Nematodes from Dispersal to Reproduction: Traits Contributing to Nematode Fitness and Biocontrol Efficacy. Journal of Nematology, 44 (2). pp. 177-184. ISSN 0022-300X

Griffin, Christine T. and Dix, Ilona and Joyce, Susan A. and Burnell, Ann M. and Downes, Martin J. (1999) Isolation and characterisation of Heterorhabditis spp. (Nematoda: Heterorhabditidae) from Hungary, Estonia and Denmark. Nematology, 1 (3). pp. 321-332.

Griffin, Christine T. and Joyce, Susan A. and Dix, Ilona and Burnell, Ann M. and Downes, Martin J. (1994) Characterisation of the entomopathogenic nematode Heterorhabditk (Nematoda : Heterorhabditidae) from Ireland and Britain by molecular and cross-breeding techniques,and the occurrence of the genus in these islands. Fundalmental Applied Nematology, 17 (3). pp. 245-253.

Griffin, Matthew D. and Ritter, Thomas and Mahon, Bernard P. (2010) Immunological Aspects of Allogeneic Mesenchymal Stem Cell Therapies. Human Gene Theraphy, 21 (12). pp. 1641-1655.

Griffin, Bryan D. and Moynagh, Paul N. (2006) In vivo binding of NF-κB to the IκBβ promoter is insufficient for transcriptional activation. Biochemical Journal, 400. pp. 115-125. ISSN 0264-6021

Griffin, Bryan D. and Moynagh, Paul N. (2006) Persistent Interleukin-1β Signaling Causes Long Term Activation of NFκB in a Promoter-specific Manner in Human Glial Cells. Journal of Biological Chemistry, 281 (15). pp. 10316-10326. ISSN 0021-9258

Griffin, C.T. and Chaerani, R. and Fallon, D. and Reid, A.P. and Downes, M.J. (2000) Occurrence and distribution of the entomopathogenic nematodes Steinernema spp. and Heterorhabditis indica in Indonesia. Journal of Helminthology, 74 (2). pp. 143-150. ISSN 0022-149X

Griffin, C.T. and O'Callaghan, K.M. and Dix, I. (2001) A self-fertile species of Steinernema from Indonesia: further evidence of convergent evolution amongst entomopathogenic nematodes? Parasitology, 122. pp. 181-186. ISSN 0031-1820

Griffin, Matthew D. and Elliman, Stephen J and Cahill, Emer and English, Karen (2013) Concise Review: Adult Mesenchymal Stromal Cell Therapy for Inflammatory Diseases: How Well Are We Joining the Dots? Stem Cells, 31. pp. 2033-2041. ISSN 1549-4918

Griffith, Darren M. and Duff, Brian and Suponitsky, Kyrill Y. and Kavanagh, Kevin and Morgan, Maria P. and Egan, Denise and Marmion, Celine J. (2011) Novel trans-platinum complexes of the histone deacetylase inhibitor valproic acid; synthesis, in vitro cytotoxicity and mutagenicity. Journal of Inorganic Biochemistry, 105 (6). pp. 793-799. ISSN 0162-0134

Gu, Lili and Fullam, Anthony and Brennan, Ruth and Schroeder, Martina (2013) Human DEAD Box Helicase 3 Couples IκB Kinase ε to Interferon Regulatory Factor 3 Activation. Molecular and Cellular Biology, 33 (10). pp. 2004-2015. ISSN 0270-7306

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Haggerty, Leanne S. (2012) Exploring the Non-vertical Component of Bacterial Evolution Using Network Structures. PhD thesis, National University of Ireland Maynooth.

Haggerty, Leanne S. and Jachiet, Pierre-Alain and Hanage, William P. and Fitzpatrick, David A. and Lopez, Philippe and O'Connell, Mary J. and Pisani, Davide and Wilkinson, Mark and Bapteste, Eric and McInerney, James O. (2014) A Pluralistic Account of Homology: Adapting the Models to the Data. Molecular Biology and Evolution, 31 (3). pp. 501-506. ISSN 0737-4038

Haggerty, Leanne S. and Martin, Fergal J. and Fitzpatrick, David A. and McInerney, James O. (2009) Gene and genome trees conflict at many levels. Philosophical Transactions of the Royal Society B, 364 (1527). pp. 2209-2219. ISSN 0080-4622

Hamilton, Sinead C. (2012) Environmentally Influenced Duplication Patterns Followed by Functional Shifts Fueling the Evolution of Metazoan Sensory Systems. PhD thesis, National University of Ireland Maynooth.

Hammel, Stephen (2013) Characterising the response to gliotoxin exposure in Aspergillus fumigatus ΔgliT and ΔgliZ. PhD thesis, National University of Ireland Maynooth.

Hams, Emily and Saunders, Sean P. and Cummins, Eoin P. and O'Connor, Aisling and Tambuwala, Murtaza T. and Gallagher, William M. and Byrne, Annette and Compos-Torres, Antonio and Moynagh, Paul N. and Jobin, Christian and Taylor, Cormac T and Fallon, Padraic G. (2011) The hydroxylase inhibitor DMOG attenuates endotoxic shock via alternative activation of macrophages and IL-10 production by B-1 cells. Shock, 36 (3). pp. 295-302. ISSN 1073-2322

Harting, Rebekka and Bayram, Ozgur and Laubinger, Karen and Valerius, Oliver and Braus, Gerhard H. (2013) Interplay of the fungal sumoylationnet work for control of multicellular development. Molecular Microbiology, 90 (5). pp. 1125-1145. ISSN 1365-2958

Harvey, Christopher D. (2010) Ecological impact of entomopathogenic nematodes used to control the large pine weevil, Hylobius abietis (Coleoptera: Curculionidae). PhD thesis, National University of Ireland Maynooth.

Harvey, Deirdre and Smith, Roisin and English, Karen and Mahon, Bernard and Commins, Sean (2006) Interleukin-10 (IL-10) but not Lipopolysaccharide (LPS) produces increased motor activity and abnormal exploratory patterns while impairing spatial learning in Balb/c mice. Physiology & Behavior, 87. pp. 842-847. ISSN 0031-9384/

Harvey, Christopher D. and Alameen, Khalil M. and Griffin, Christine T. (2012) The impact of entomopathogenic nematodes on a non-target, service-providing longhorn beetle is limited by targeted application when controlling forestry pest Hylobius abietis. Biological Control, 62 (3). pp. 173-182. ISSN 1049-9644

Harvey, Christopher D. and Griffin, Christine T. (2012) Host activity and wasp experience affect parasitoid wasp foraging behaviour and oviposition on nematode-infected larvae of the forestry pest Hylobius abietis. Ecological Entomology, 37. pp. 269-282. ISSN 0307-6946

Hasin, Naushaba (2012) Functional significance of Hsp70 post-translational modification in prion propagation and cellular function. PhD thesis, National University of Ireland Maynooth.

Hasin, Naushaba and Cusack, Sarah and Ali, Shahin S. and Fitzpatrick, David A. and Jones, Gary W. (2014) Global transcript and phenotypic analysis of yeast cells expressing Ssa1, Ssa2, Ssa3 or Ssa4 as sole source of cytosolic Hsp70-Ssa chaperone activity. BMC Genomics, 15 (194). pp. 1-12. ISSN 1471-2164

Hass, Birgit and Downes, Martin and Griffin, Christine T. (2001) Correlation between survival in water and persistence of infectivity in soil of Heterorhabditis spp. isolates. Nematology, 3 (6). pp. 573-579. ISSN 1388-5545

Hasset, B. and Downes, M.J. and Griffin, C.T. (2002) Persistence of Four Heterorhabditis spp. Isolates in Soil: Role of Lipid Reserves1. Journal of Nematology, 34 (2). pp. 151-158. ISSN 0022-300X

Hassett, S. and Moynagh, P.N. and Reen, D. (2006) TNF-α is a mediator of the anti-inflammatory response in a human neonatal model of the non-septic shock syndrome. Pediatric Surgery International, 22 (1). pp. 24-30. ISSN 0179-0358

He, Chao and Fitzpatrick, David A. and O'Halloran, Damien M. (2013) A comparative study of the molecular evolution of signalling pathway members across olfactory, gustatory and photosensory modalities. Journal of Genetics, 92 (2). pp. 327-334. ISSN 0022-1333

He, Jianwei and Wang, Yu and Chang, Alan K. and Xu, Linan and Wang, Na and Chong, Xiaoying and Li, Hui and Zhang, Bing and Jones, Gary W. and Song, Youtao (2014) Myricetin Prevents Fibrillogenesis of Hen Egg White Lysozyme. Journal of Agricultural and Food Chemistry, 62. pp. 9442-9449. ISSN 0021-8561

Heggie, Laura and Jansen, Marcel A.K. and Burbridge, Emma and Kavanagh, Tony A. and Thorneley, Roger N.F. and Dix, Philip J. (2005) Transgenic tobacco (Nicotiana tabacum L. cv. Samsun-NN) plants over-expressing a synthetic HRP-C gene are altered in growth, development and susceptibility to abiotic stress. Plant Physiology and Biochemistry, 43 (12). pp. 1067-1073. ISSN 0981-9428

Helmstaedt, Kerstin and Laubinger, Karen and Vosskuhl, Katja and Bayram, Ozgur and Busch, Silke and Hoppert, Michael and Valerius, Oliver and Seiler, Stephan and Braus, Gerhard H. (2008) The Nuclear Migration Protein NUDF/LIS1 Forms a Complex with NUDC and BNFA at Spindle Pole Bodies. Eukaryotic Cell, 7 (6). pp. 1041-1052. ISSN 1535-9778

Hennessy, Roseanne (2012) Effects of a dual application of entomopathogenic nematodes and entomopathogenic fungi against a forest pest, Hylobius abietis L. (Coleoptera: Curculionidae) and a horticultural pest, Otiorhynchus sulcatus F. (Coleoptera: Curculionidae). Masters thesis, National University of Ireland Maynooth.

Hogan, Andrew E. (2010) Characterisation of the immunomodulatory properties of human natural killer T cells. PhD thesis, National University of Ireland Maynooth.

Hogan, A.E. and Tobin, A.M. and Ahern, T. and Corrigan, M.A. and Gaoatswe, G. and Jackson, R. and O’Reilly, V. and Lynch, L. and Doherty, D.G. and Moynagh, P.N. and Kirby, B. and O’Connell, J. and O'Shea, D. (2011) Glucagon-like peptide-1 (GLP-1) and the regulation of human invariant natural killer Tcells: lessons from obesity, diabetes and psoriasis. Diabetologia, 54 (11). pp. 2745-2754. ISSN 0012-186X

Holland, Ashling (2015) Proteomic Profiling of Animal Models of Motor Neuron Disease and Muscular Dystrophy. PhD thesis, National University of Ireland Maynooth.

Holland, Ashling and Dowling, Paul and Ohlendieck, Kay (2014) New pathobiochemical insights into dystrophinopathy from the proteomics of senescent mdx mouse muscle. Frontiers in Aging Neuroscience, 6 (109). pp. 1-5. ISSN 1663-4365

Holland, Ashling and Dowling, Paul and Zweyer, Margit and Swandulla, Dieter and Henry, Michael and Clynes, Martin and Ohlendieck, Kay (2013) Proteomic profiling of cardiomyopathic tissue from the aged mdx model of Duchenne muscular dystrophy reveals a drastic decrease in laminin, nidogen and annexin. Proteomics, 13 (15). pp. 2312-2323. ISSN 1615-9853

Holland, Ashling and Schmitt-John, Thomas and Dowling, Paul and Meleady, Paula and Henry, Michael and Clynes, Martin and Ohlendieck, Kay (2014) Intricate effects of primary motor neuronopathy on contractile proteins and metabolic muscle enzymes as revealed by label-free mass spectrometry. Bioscience Reports, 34 (4). pp. 331-343. ISSN 1573-4935

Holton, Therese A. (2011) Phylogenomic supertrees: integration of maximal data and assessment of input tree shape. PhD thesis, National University of Ireland Maynooth.

Horgan, Alan (2012) Functional Characterisation of a Novel Tir-Domain containing Protein in Immune Signalling. Masters thesis, National University of Ireland Maynooth.

Howard-Williams, Emma (2013) A Phylogeographic Study of Arenaria ciliata and Arenaria norvegica in Ireland and Europe. PhD thesis, National University of Ireland Maynooth.

Humphries, Fiachra (2012) Investigating the regulation and enzymatic function of human ecsit in innate immune signalling. PhD thesis, National University of Ireland Maynooth.

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Jackson, Ruaidhri (2013) Defining the Physiological and Molecular Role of Pellino3 in TLR3 Signalling. PhD thesis, National University of Ireland Maynooth.

James-Arroyo, Rafael and Lara-Rojas, Fernando and Bayram, Ozgur and Valerius, Oliver and Braus, Gerhard H. and Aguirrea, Jesus (2015) The SrkA Kinase Is Part of the SakA Mitogen-Activated Protein Kinase Interactome and Regulates Stress Responses and Development in Aspergillus nidulans. Eukaryotic Cell, 14 (5). pp. 295-510. ISSN 1535-9778

Jansen, Marcel A.K. and Elfstrand, Malin and Heggie, Laura and Sitbon, Folke and Dix, Philip J. and Thorneley, Roger N.F. (2004) Over-expression of phenol-oxidising peroxidases alters the UV-susceptibility of transgenic Nicotiana tabacum. New Phytologist, 163 (3). pp. 585-594. ISSN 0028-646X

Jarmuda, Stanislaw and O’Reilly, Niamh and Zaba, Ryszard and Jakubowicz, Oliwia and Szkaradkiewicz, Andrzej and Kavanagh, Kevin (2012) The potential role of Demodex folliculorum mites and bacteria in the induction of rosacea. Journal of Medical Microbiology, 61 (11 ). pp. 1504-1510. ISSN 0022-2615

Jarmuda, Stanislaw and McMahon, Fred and Zaba, Ryszard and O'Reilly, Niamh and Jakubowicz, Oliwia and Holland, Ashling and Szkaradkiewicz, Andrzej and Kavanagh, Kevin (2014) Correlation between serum reactivity to Demodex-associated Bacillus oleronius proteins, and altered sebum levels and Demodex populations in erythematotelangiectatic rosacea patients. Journal of Medical Microbiology, 63. pp. 258-262. ISSN 0022-2615

Jockusch, Harald and Holland, Ashling and Staunton, Lisa and Schmitt-John, Thomas and Heimann, Peter and Dowling, Paul and Ohlendieck, Kay (2014) Pathoproteomics of testicular tissue deficient in the GARP component VPS54: The wobbler mouse model of globozoospermia. Proteomics, 14 (7-8). pp. 839-852. ISSN 1615-9853

Johnk, Bastian and Bayram, Ozgur and Abelman, Anja and Heinekamp, Thorsten and Mattern, Derek J. and Brakhage, Axel A. and Jacobsen, Ilse D. and Valerius, Oliver and Braus, Gerhard H. (2016) SCF Ubiquitin Ligase F-box Protein Fbx15 Controls Nuclear Co-repressor Localization, Stress Response and Virulence of the Human Pathogen Aspergillus fumigatus. PLoS Pathogens, 12 (9). ISSN 1553-7374

Johnson, Gemma and Ferrini, Arianna and Dolan, Stephen K. and Nolan, Tania and Agrawal, Samir and Doyle, Sean and Bustin, Stephen A. (2014) Biomarkers for invasive aspergillosis: the challenges continue. Biomarkers in Medicine, 8 (3). pp. 429-451. ISSN 1752-0363

Johnstone, Catriona R. and O'Dushlaine, Colm and Fitzpatrick, David A. and Edwards, Richard J. and Shields, Denis C. (2007) Evaluation of Whether Accelerated Protein Evolution in Chordates Has Occurred before, after, or Simultaneously with Gene Duplication. Molecular Biology and Evolution, 24 (1). pp. 315-323. ISSN 0737-4038

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Kavanagh, Kevin and Reeves, Emer P. (2004) Exploiting the potential of Insects for in vivo pathogenicity testing of Microbial pathogen. FEMS Microbiology Reviews, 28. pp. 101-112.

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Kavanagh, H. and Noone, C. and Cahill, E. and English, K. and Locht, C. and Mahon, B.P. (2010) Attenuated Bordetella pertussis vaccine strain BPZE1 modulates allergen-induced immunity and prevents allergic pulmonary pathology in a murine model. Clinical & Experimental Allergy, 40 (6). pp. 933-941. ISSN 1365-2222

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Keady, S.M. and Kenny, D.A. and Ohlendieck, Kay and Doyle, Sean and Keane, M.G. and Waters, S.M. (2013) Proteomic profiling of bovine M. longissimus lumborum from Crossbred Aberdeen Angus and Belgian Blue sired steers varying in genetic merit for carcass weight. Journal of Animal Science, 91 (2). pp. 654-665. ISSN 0021-8812

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Li, Jianjing and O'Reilly, Niamh and Sheha, Hosam and Katz, Raananah and Raju, Vadrevu K. and Kavanagh, Kevin and Scheffer, C. G. Tseng (2010) Correlation between Ocular Demodex Infestation and Serum Immunoreactivity to Bacillus Proteins in Patients with Facial Rosacea. Ophthalmology, 117 (5). pp. 870-877. ISSN 0161-6420

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Mahon, Bernard P. and Doyle, Sean and Kavanagh, Kevin and Corcoran, Amanda and Ennis, O. (2001) Baculovirus expression of parvovirus B19 (B19V) NS1: utility in confirming recent infection. Journal of Clinical Virology, 22 (1). pp. 55-60. ISSN 1386-6532

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Moran, Ciara and Kinsella, Gemma K. and Zhang, Zai-Rong and Perrett, Sarah and Jones, Gary W. (2013) Mutational Analysis of Sse1 (Hsp110) Suggests an Integral Role for this Chaperone in Yeast Prion Propagation In Vivo. G3. ISSN 2160-1836

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Mullen, Edel and O'Reilly, Elaine and Ohlendieck, Kay (2011) Skeletal muscle tissue from the Goto-Kakizaki rat model of type-2 diabetes exhibits increased levels of the small heat shock protein Hsp27. Molecular Medicine Reports, 4. pp. 229-236. ISSN 1791-2997

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O'Hanlon, Karen A. and Gallagher, Lorna and Schrettl, Markus and Jöchl, Christoph and Kavanagh, Kevin and Larsen, Thomas O. and Doyle, Sean (2012) Nonribosomal Peptide Synthetase Genes pesL and pes1 Are Essential for Fumigaclavine C Production in Aspergillus fumigatus. Applied and Environmental Microbiology , 78 (10). pp. 3166-3176. ISSN 0099-2240

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O'Keeffe, Joseph and Doyle, Sean and Kavanagh, Kevin (2003) Exposure of the yeast Candida albicans to the anti-neoplastic agent adriamycin increases the tolerance to amphotericin B. Journal of Pharmacy and Pharmacology, 55 (12). pp. 1629-1633.

O'Keeffe, Grainne (2011) Functional Characterisation of the Eukaryotic Translation Elongation Factor 1Bγ in Aspergillus fumigatus; A Proteomic Systems Approach. PhD thesis, National University of Ireland Maynooth.

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O'Loughlin, Aran (2011) Examination of the effect of weaning stress on the physiological and molecular regulation of immune function in circulating bovine leukocytes. PhD thesis, National University of Ireland Maynooth.

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O'Mahony Zamora, Georgina (2013) De novo sequencing, assembly and analysis of the genome and transcriptome of the nematode Panagrolaimus superbus. PhD thesis, National University of Ireland Maynooth.

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O'Reilly, Niamh (2012) An Investigation of the Role of Bacillus oleronius in the Pathogenesis of Rosacea. PhD thesis, National University of Ireland Maynooth.

O'Reilly, Niamh and Gallagher, Clair and Reddy Katikireddy, Kishore and Clynes, Martin and O'Sullivan, Finbarr and Kavanagh, Kevin (2012) Demodex-Associated Bacillus Proteins Induce an Aberrant Wound Healing Response in a Corneal Epithelial Cell Line: Possible Implications for Corneal Ulcer Formation in Ocular Rosacea. Investigative Ophthalmology & Visual Science, 53. pp. 3250-3259. ISSN 0146-0404

O'Reilly, Clare and Pette, Dirk and Ohlendieck, Kay (2003) Increased expression of the nicotinic acetylcholine receptor in stimulated muscle. Biochemical and Biophysical Research Communications, 300 (2). pp. 585-591. ISSN 0006-291X

O'Reilly, N. and Bergin, D. and Reeves, E.P. and McElvaney, N.G. and Kavanagh, K. (2012) Demodex-associated bacterial proteins induce neutrophil activation. British Journal of Dermatology, 166 (4). pp. 753-760. ISSN 0007-0963

O'Reilly, Susan M. and Moynagh, Paul N. (2003) Regulation of Toll-like receptor 4 signalling by A20 zinc finger protein. Biochemical and Biophysical Research Communications, 303 (2). pp. 586-593. ISSN 0006-291X

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Walsh, Fiona and Duffy, Brion (2013) The Culturable Soil Antibiotic Resistome: A Community of Multi-Drug Resistant Bacteria. PLoS ONE. ISSN 1932-6203

Walsh, Fiona and Ingenfeld, A. and Zampicolli, M. and Hilber-Bodmer, M. and Frey, Jurg E. and Duffy, B. (2011) Real-time PCR methods for quantitative monitoring of streptomycin and tetracycline resistance genes in agricultural ecosystems. Journal of Microbiological Methods, 86 (2). pp. 150-155. ISSN 0167-7012

Walsh, Fiona and Pelludat, C. and Duffy, B. and Smith, D.P. and Owens, Sarah M. and Frey, Jurg E. and Holliger, E. (2014) Einfluss von Streptomycin in Apfelanlagen auf Antibiotika-Resistenzen in der Umwelt. Agrarforschung Schweiz 5(7+08), 300-305, 2014, 5 (7-8). pp. 300-305.

Walsh, Fiona and Rogers, Thomas R. (2012) Comparison of plasmid-mediated quinolone resistance and extended-spectrum b-lactamases in third-generation cephalosporin-resistant Enterobacteriaceae from four Irish hospitals. Journal of Medical Microbiology, 61. pp. 142-147. ISSN 0022-2615

Walsh, Fiona and Rogers, Thomas R. (2008) Detection of blaVIM-2 carbapenemase in Pseudomonas aeruginosa in Ireland. Journal of Antimicrobial Chemotherapy, 61 (1). pp. 219-220. ISSN 0305-7453

Walsh, Fiona and Smith, Daniel P. and Owens, Sarah M. and Duffy, Brion and Frey, Jurg E. (2014) Restricted streptomycin use in apple orchards did not adversely alter the soil bacteria communities. Frontiers in Microbiology. ISSN 1664-302X

Walsh, Fiona and Willcock, Joanne and Amyes, Sebastian G.B. (2003) High-level telithromycin resistance in laboratory-generated mutants of Streptococcus pneumoniae. Journal of Antimicrobial Chemotherapy, 52 (3). pp. 345-353. ISSN 0305-7453

Walsh, Naomi and Dowling, Paul and O'Donovan, Norma and Henry, Michael and Meleady, Paula and Clynes, Martin (2008) Aldehyde dehydrogenase 1A1 and gelsolin identified as novel invasion-modulating factors in conditioned medium of pancreatic cancer cells. Journal of Proteomics, 71 (5). pp. 561-571. ISSN 1874-3919

Walsh, Naomi and Larkin, Annemarie and Swan, Niall and Conlon, Kevin and Dowling, Paul and McDermott, Ray and Clynes, Martin (2011) RNAi knockdown of Hop (Hsp70/Hsp90 organising protein) decreases invasion via MMP-2 down regulation. Cancer Letters, 306 (2). pp. 180-189. ISSN 0304-3835

Walsh, Naomi and O'Donovan, Norma and Kennedy, Susan and Henry, Michael and Meleady, Paula and Clynes, Martin and Dowling, Paul (2009) Identification of pancreatic cancer invasion-related proteins by proteomic analysis. Proteome Science, 7 (3). ISSN 1477-5956

Wang, Yulang and Carolan, James C. and Hao, FuHua and Nicholson, Jeremy K. and Wilkinson, Thomas L. and Douglas, Angela E. (2010) Integrated Metabonomic-Proteomic Analysis of an Insect-Bacterial Symbiotic System. Journal of Proteome Research, 9 (3). pp. 1257-1267. ISSN 1535-3893

Wang, Bingwei (2011) Investigating the Role of Pellin03 in TNF Signalling. PhD thesis, National University of Ireland Maynooth.

Ward, Natalie-Anne and Hirst, Simon and Williams, John and Findlay, John B. C. (2012) Pharmacological chaperones increase the cell-surface expression of intracellularly retained mutants of the melanocortin 4 receptor with unique rescuing efficacy profiles. Biochemical Society Transactions, 40. pp. 717-720. ISSN 0300-5127

Waters, Sinead M. and Doyle, Sean and Murphy, Richard A. and Power, Ronan F.G. (2005) Development of solution phase hybridisation PCR-ELISA for the detection and quantification of Enterococcus faecalis and Pediococcus pentosaceus in Nurmi-type cultures. Journal of Microbiological Methods, 63 (3). pp. 264-275. ISSN 0167-7012

Weiss, A. and Scheller, F. and Oggenfuss, M. and Walsh, Fiona and Frey, Jurg E. and Drissner, D. and Schmidt, H. (2016) Analysis of the bacterial epiphytic microbiota of oak leaf lettuce with 16S ribosomal RNA gene analysis. Journal of Microbiology, Biotechnology and Food Sciences, 5 (3). pp. 271-276. ISSN 1338-5178

Wellmer, Frank and Graciet, Emanuelle and Riechmann, José Luis (2014) Specification of floral organs in Arabidopsis. Journal of Experimental Botany, 65 (1). pp. 1-9. ISSN 0022-0957

Wessel, Peter M. and Graciet, Emanuelle and Douce, Roland and Dumas, Renaud (2000) Evidence for Two Distinct Effector-Binding Sites in Threonine Deaminase by Site-Directed Mutagenesis, Kinetic, and Binding Experiments. Biochemistry, 39 (49). pp. 15136-15143. ISSN 0006-2960

Wilkinson, Mark and Thorley, Joseph L. and Pisani, David E. and Lapointe, Francois-Joseph and McInerney, James O. (2004) Some Desiderata for Liberal Supertrees. In: UNSPECIFIED Kluwer Academic Publishers, p. 564.

Williams, Paul H. and An, Jiandong and Brown, Mark J. F. and Carolan, James C. and Goulson, Dave and Huang, Jiaxing and Ito, Masao (2012) Cryptic Bumblebee Species: Consequences for Conservation and the Trade in Greenhouse Pollinators. PLoS ONE, 7 (3). e32992. ISSN 1932-6203

Williams, Christopher D. and Dillon, Aoife B. and Girling, Robbie D. and Griffin, Christine T. (2013) Organic soils promote the efficacy of entomopathogenic nematodes, with different foraging strategies, in the control of a major forest pest: A meta-analysis of field trial data. Biological Control, 65. pp. 357-364. ISSN 1049-9644

Williams, Christopher D. and Dillon, Aoife B. and Harvey, Christopher D. and Hennessy, Roseanne and Mc Namara, Louise and Griffin, Christine T. (2013) Control of a major pest of forestry, Hylobius abietis, with entomopathogenic nematodes and fungi using eradicant and prophylactic strategies. Forest Ecology and Management, 305. pp. 212-222. ISSN 0378-1127

Williams, Paul H. and Brown, Mark J.F. and Carolan, James C. and An, Jiandong and Goulson, Dave and Aytekin, A. Murat and Best, Lincoln R. and Byvaltsev, Alexandr M. and Cederberg, Bjorn and Dawson, Robert and Huang, Jiaxing and Ito, Masao and Monfarad, Alireza and Raina, Rifat H. and Schmid-Hempel, Paul and Sheffield, Cory S. and Šima, Peter and Xie, Zenghua (2012) Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae). Systematics and Biodiversity, 10 (1). pp. 21-56. ISSN 1477-2000

Winkelstroter, Lizziane K. and Dolan, Stephen K. and Fernanda dos Reis, Thaila and Pedro Bom, Vinicius Leite and Alves de Castro, Patricia and Hagiwara, Daisuke and Alowni, Raneem and Jones, Gary W. and Doyle, Sean and Brown, Neil Andrew and Goldman, Gustavo H. (2015) Systematic Global Analysis of Genes Encoding Protein Phosphatases in Aspergillus fumigatus. G3 : Genes, Genomes, Genetics, 5. pp. 1525-1539. ISSN 2160-1836

Wren, A.W. and Coughlan, A. and Smale, K.E. and Misture, S.T. and Mahon, Bernard P. and Clarkin, O.M. and Towler, M.R. (2012) Fabrication of CaO–NaO–SiO 2 /TiO 2 scaffolds for surgical applications. Journal of Materials Science: Materials in Medicine, 23 (12). pp. 2881-2891. ISSN 1573-4838

Wuest, Samuel E. and O'Maoileidigh, Diarmuid S. and Rae, Liina and Kwasniewska, Kamila and Raganelli, Andrea and Hanczaryka, Katarzyna and Lohan, Amanda J. and Loftus, Brendan and Graciet, Emanuelle and Wellmer, Frank (2012) Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA. Proceedings of the National Academy of Sciences, 109 (33). pp. 13452-13457. ISSN 1091-6490

X

Xu, Li-Qiong and Wu, Si and Buell, Alexander K. and Cohen, Samuel I.A. and Chen, Li-Jun and Hu, Wan-Hui and Cusack, Sarah and Itzhaki, Laura S. and Zhang, Hong and Knowles, Tuomas P.J. and Dobson, Christopher M. and Welland, Mark E. and Jones, Gary W. and Perrett, Sarah (2013) Influence of specific HSP70 domains on fibril formation of the yeast prion protein Ure2. Philosophical Transactions of the Royal Society B, 368 (1617). p. 20110410. ISSN 0962-8436

Xu, Linan and Hasin, Naushaba and Shen, Manli and He, Jianwei and Xue, Youlin and Zhou, Xiaohong and Perrett, Sarah and Song, Youtao and Jones, Gary W. (2013) Using Steered Molecular Dynamics to Predict and Assess Hsp70 Substrate-Binding Domain Mutants that Alter Prion Propagation. PLoS Computational Biology, 9 (1). ISSN 1553-734X

Y

Yang, Shuo and Wang, Bingwei and Humphries, Fiachra and Jackson, Ruaidhri and Healy, Mark and Bergin, Ronan and Aviello, Gabriella and Hall, Barry and McNamara, Deirdre and Darby, Trevor and Quinlan, Aoife and Shanahan, Fergus and Melgar, Silvia and Fallon, Padraic G. and Moynagh, Paul N. (2013) Pellino3 ubiquitinates RIP2 and mediates Nod2-induced signaling and protective effects in colitis. Nature Immunology, 14 (9). pp. 927-936. ISSN 1529-2908

Young, Pamela A. (2013) The effect of Retinol Binding Protein on the Proteome of muscle cells. PhD thesis, National University of Ireland Maynooth.

Z

Zenner, Annemie N.R.L. (2011) Factors influencing the outcome of male-male encounters in the entomopathogenic nematode Steinernema spp. PhD thesis, National University of Ireland Maynooth.

Zenner, Annemie N.R.L. and O'Callaghan, Kathryn M. and Griffin, Christine T. (2014) Lethal Fighting in Nematodes Is Dependent on Developmental Pathway: Male-Male Fighting in the Entomopathogenic Nematode Steinernema longicaudum. PLoS ONE, 9 (2). e89385. ISSN 1932-6203

Ó

Ó’Maoiléidigh, Diarmuid S. and Wuest, Samuel E. and Rae, Liina and Raganelli, Andrea and Ryan, Patrick T. and Kwasniewska, Kamila and Das, Pradeep and Lohan, Amanda J. and Loftus, Brendan and Graciet, Emanuelle and Wellmer, Frank (2013) Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUSC. Plant Cell, 25 (7). pp. 2482-2503. ISSN 1040-4651

Ó’Maoiléidigh, Diarmuid Seosamh and Graciet, Emanuelle and Wellmer, Frank (2014) Gene networks controlling Arabidopsis thaliana flower development. New Phytologist, 201 (1). pp. 16-30. ISSN 0028-646X

This list was generated on Mon Feb 20 19:05:14 2017 GMT.